Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU6-969P-201ENST00000383900 105 ntBASIC1.45□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-144P-201ENST00000383951 107 ntBASIC1.45□□□□□ -2.18
POLR1BQ9H9Y6 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
POLR1BQ9H9Y6 HMGN2P32-201ENST00000444648 269 ntBASIC1.45□□□□□ -2.18
POLR1BQ9H9Y6 RNU1-123P-201ENST00000458950 160 ntBASIC1.45□□□□□ -2.18
POLR1BQ9H9Y6 AC092991.1-201ENST00000477176 376 ntBASIC1.45□□□□□ -2.18
POLR1BQ9H9Y6 AC098869.1-201ENST00000481627 292 ntBASIC1.45□□□□□ -2.18
POLR1BQ9H9Y6 AL512310.8-201ENST00000550183 120 ntBASIC1.45□□□□□ -2.18
POLR1BQ9H9Y6 MIR3664-201ENST00000579074 99 ntBASIC1.45□□□□□ -2.18
POLR1BQ9H9Y6 U6.104-201ENST00000637979 90 ntBASIC1.45□□□□□ -2.18
POLR1BQ9H9Y6 Y_RNA.84-201ENST00000363011 104 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-713P-201ENST00000384761 107 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 MIR606-201ENST00000384851 96 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 MIR215-201ENST00000384858 110 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 MIR452-201ENST00000385020 85 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-131P-201ENST00000391144 107 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 SNORA36B-201ENST00000410438 131 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 SNRPGP10-201ENST00000432323 225 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-437P-201ENST00000459408 95 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 MIR4452-201ENST00000583004 71 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 JPX_2.1-201ENST00000614161 69 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.44□□□□□ -2.18
POLR1BQ9H9Y6 AL161722.3-201ENST00000605789 2983 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 Y_RNA.242-201ENST00000364473 110 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 snoU2-30.1-201ENST00000365012 70 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 SNORA26.5-201ENST00000391215 123 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 AL451046.2-201ENST00000403074 277 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-1203P-201ENST00000410703 110 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 DYNLT3P2-201ENST00000442517 295 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-1007P-201ENST00000516586 107 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 SNORA27.4-201ENST00000516650 95 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 RNA5SP102-201ENST00000516865 106 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 AL357312.1-201ENST00000603879 298 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 AC106754.2-201ENST00000623006 233 ntBASIC1.43□□□□□ -2.18
POLR1BQ9H9Y6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
POLR1BQ9H9Y6 Y_RNA.26-201ENST00000362539 101 ntBASIC1.42□□□□□ -2.18
POLR1BQ9H9Y6 SNORA63C-201ENST00000364578 129 ntBASIC1.42□□□□□ -2.18
POLR1BQ9H9Y6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
POLR1BQ9H9Y6 MTND5P22-201ENST00000458380 195 ntBASIC1.42□□□□□ -2.18
POLR1BQ9H9Y6 AC091959.1-201ENST00000495857 238 ntBASIC1.42□□□□□ -2.18
POLR1BQ9H9Y6 AC114811.1-201ENST00000507207 168 ntBASIC1.42□□□□□ -2.18
POLR1BQ9H9Y6 SERF1AP1-201ENST00000514575 187 ntBASIC1.42□□□□□ -2.18
POLR1BQ9H9Y6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
POLR1BQ9H9Y6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 UBE2WP1-201ENST00000362030 340 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-1084P-201ENST00000362498 107 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-1272P-201ENST00000362776 107 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 Y_RNA.336-201ENST00000365307 109 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-42P-201ENST00000384165 107 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-763P-201ENST00000390865 106 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 RNU2-14P-201ENST00000411053 191 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 AC093850.1-201ENST00000454121 251 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-917P-201ENST00000516294 104 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-1338P-201ENST00000516328 91 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 SNORD45.4-201ENST00000516629 73 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 AC005357.1-201ENST00000588399 301 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 AC091895.1-201ENST00000624494 256 ntBASIC1.41□□□□□ -2.18
POLR1BQ9H9Y6 RNU6-1048P-201ENST00000364054 107 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 RNU6-738P-201ENST00000384531 106 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 MIR15B-201ENST00000385045 98 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 MTCO2P33-201ENST00000402100 465 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 MLLT10P1-201ENST00000418346 262 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 PIGPP3-201ENST00000425307 415 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 RNU6-635P-201ENST00000516651 102 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 AL078603.1-201ENST00000603824 313 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 AC013791.1-201ENST00000616619 62 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.4□□□□□ -2.19
POLR1BQ9H9Y6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 RNU6-1205P-201ENST00000363625 106 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 RNU6-1209P-201ENST00000363655 107 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 Y_RNA.217-201ENST00000364214 105 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 MIR548F4-201ENST00000408515 105 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 Y_RNA.641-201ENST00000459414 105 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 Y_RNA.637-201ENST00000459424 114 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 TRBVB-201ENST00000477100 408 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 RNA5SP220-201ENST00000516298 104 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 RN7SKP88-201ENST00000516847 250 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 7SK.8-201ENST00000612110 250 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 7SK.11-201ENST00000615477 250 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 7SK.13-201ENST00000622040 250 ntBASIC1.39□□□□□ -2.19
POLR1BQ9H9Y6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
POLR1BQ9H9Y6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms