Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 DNAJC19P2-201ENST00000593340 302 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 MIR6895-201ENST00000613497 78 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 AL591926.4-201ENST00000616895 298 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.778-201ENST00000620203 90 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 RNA5SP99-201ENST00000364020 114 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-1138P-201ENST00000365359 106 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-484P-201ENST00000384016 107 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 MIR764-201ENST00000390811 85 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-440P-201ENST00000390882 105 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 FTH1P12-201ENST00000432137 551 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 AC245047.4-201ENST00000433189 144 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 AC069257.2-201ENST00000441819 155 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 NDUFA4P2-201ENST00000489989 244 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 RNU7-28P-201ENST00000516759 62 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-789P-201ENST00000517105 102 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 AL160236.1-201ENST00000556317 195 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 MIR378D2-201ENST00000580636 98 ntBASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
AMBRA1Q9C0C7 SNORD114-1-201ENST00000362705 72 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.521-201ENST00000384560 114 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 SNORA12.1-201ENST00000390873 148 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 SNORA48.1-201ENST00000390879 135 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 RNA5SP153-201ENST00000516498 76 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-197P-201ENST00000516680 100 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-126P-201ENST00000516685 103 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 SNORA31.25-201ENST00000517242 134 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 SUB1P4-201ENST00000566062 339 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 MIR4662B-201ENST00000579498 81 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 MIR8054-201ENST00000620877 86 ntBASIC2.06□□□□□ -2.08
AMBRA1Q9C0C7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 SNORD68-201ENST00000363214 84 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.215-201ENST00000364204 112 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-818P-201ENST00000364837 108 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 MIR522-201ENST00000385071 87 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 MIR613-201ENST00000385248 95 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-131P-201ENST00000391144 107 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 RNA5SP482-201ENST00000391269 118 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 SNORA26-201ENST00000391286 122 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 RNU2-70P-201ENST00000410718 179 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 RNA5SP501-201ENST00000410990 112 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 SNORD116-25-201ENST00000516517 92 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 AC121758.2-201ENST00000553271 193 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 U1.36-201ENST00000620684 176 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 AC009831.4-201ENST00000620744 325 ntBASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.634-201ENST00000364811 113 ntBASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 RNA5SP138-201ENST00000365098 114 ntBASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 SNORD50.2-201ENST00000365465 70 ntBASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.486-201ENST00000384398 107 ntBASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.488-201ENST00000384403 102 ntBASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 ZNF702P-202ENST00000434269 1966 ntBASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 RNU7-193P-201ENST00000516723 65 ntBASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 MIR3646-201ENST00000578301 84 ntBASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 AC087685.1-201ENST00000587507 141 ntBASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 MIR6844-201ENST00000637122 62 ntBASIC2.04□□□□□ -2.08
AMBRA1Q9C0C7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 SNORA63D-201ENST00000364359 132 ntBASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.242-201ENST00000364473 110 ntBASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.343-201ENST00000365354 112 ntBASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 SNORA6-201ENST00000384033 151 ntBASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-365P-201ENST00000517113 106 ntBASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 MIR4529-201ENST00000578110 78 ntBASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 MIR5694-201ENST00000581190 76 ntBASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 MIR4762-201ENST00000585261 75 ntBASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-1084P-201ENST00000362498 107 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 Y_RNA.164-201ENST00000363709 102 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-704P-201ENST00000364162 103 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 Y_RNA.393-201ENST00000383936 102 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-768P-201ENST00000384683 107 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 MIR520A-201ENST00000384862 85 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 201 ms