Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC026436.1-201ENST00000510537 270 ntBASIC2.4□□□□□ -2.03
LRFN3Q9BTN0 AC024995.1-201ENST00000523014 93 ntBASIC2.4□□□□□ -2.03
LRFN3Q9BTN0 MIR4446-201ENST00000578505 67 ntBASIC2.4□□□□□ -2.03
LRFN3Q9BTN0 AC007229.1-201ENST00000590455 412 ntBASIC2.4□□□□□ -2.03
LRFN3Q9BTN0 AC005972.2-201ENST00000604690 348 ntBASIC2.4□□□□□ -2.03
LRFN3Q9BTN0 AL359075.3-201ENST00000613288 217 ntBASIC2.4□□□□□ -2.03
LRFN3Q9BTN0 MIR338-201ENST00000636369 67 ntBASIC2.4□□□□□ -2.03
LRFN3Q9BTN0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
LRFN3Q9BTN0 RNU6-834P-201ENST00000362367 110 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 RNU7-107P-201ENST00000459121 61 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 RNU6-437P-201ENST00000459408 95 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 RPL23AP54-201ENST00000495129 419 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 RNA5SP20-201ENST00000515976 84 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 RNU6-63P-201ENST00000516690 95 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 RNU7-193P-201ENST00000516723 65 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 SNORA31.15-201ENST00000516771 132 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 RNU7-116P-201ENST00000516940 62 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 AC027419.1-201ENST00000522976 328 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 MIR4438-201ENST00000585271 93 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 U7.2-201ENST00000607576 63 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 MIR1291-201ENST00000627649 87 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 FO624990.1-201ENST00000636373 85 ntBASIC2.39□□□□□ -2.03
LRFN3Q9BTN0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 RNA5SP393-201ENST00000363423 117 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 SNORD114-26-201ENST00000363543 72 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 RNU6-674P-201ENST00000363831 107 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 RNU6-153P-201ENST00000364422 104 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 RNU6-597P-201ENST00000365620 102 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 Y_RNA.525-201ENST00000384570 113 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 Y_RNA.563-201ENST00000384707 108 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 AL512604.1-201ENST00000404812 257 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 RN7SKP101-201ENST00000411376 320 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 RPS15AP28-201ENST00000435088 386 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 AC069257.2-201ENST00000441819 155 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 RNU1-142P-201ENST00000516682 145 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 AC120024.3-201ENST00000603167 156 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 U6.73-201ENST00000619194 103 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 AL391516.1-201ENST00000554380 2449 ntBASIC2.38□□□□□ -2.03
LRFN3Q9BTN0 AC007336.1-201ENST00000576365 3828 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 RNU1-96P-201ENST00000364163 162 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 RNU6-915P-201ENST00000364943 103 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 RNU6-1056P-201ENST00000383996 107 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 RNA5SP323-201ENST00000391094 133 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 RNA5SP496-201ENST00000391240 109 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 SNORD23.1-201ENST00000408212 104 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 MIR1283-2-201ENST00000408621 87 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 AC004486.1-201ENST00000546846 233 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 MIR378D2-201ENST00000580636 98 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.37□□□□□ -2.03
LRFN3Q9BTN0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 AC016717.2-201ENST00000609089 5141 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 RNU4-41P-201ENST00000364426 143 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 RNU6-1336P-201ENST00000383886 109 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 AL023284.1-201ENST00000403956 276 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 RNA5SP511-201ENST00000410487 115 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 RN7SKP179-201ENST00000516126 217 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 RNU7-99P-201ENST00000516271 62 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 RNU2-19P-201ENST00000517288 84 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 AC015720.1-201ENST00000565251 277 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 MIR3670-2-201ENST00000582974 65 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 MIR3670-1-201ENST00000584160 65 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 MIR3670-3-201ENST00000584855 65 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 AC002984.1-201ENST00000591692 448 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 AC069114.2-201ENST00000604699 304 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 AL021707.8-201ENST00000609428 183 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 MIR3670-4-201ENST00000612260 65 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 AC008555.8-201ENST00000623602 2168 ntBASIC2.36□□□□□ -2.03
LRFN3Q9BTN0 RNU6-862P-201ENST00000362804 105 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 RNU6-457P-201ENST00000363999 107 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 RNU6-117P-201ENST00000365415 107 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 RNU6-484P-201ENST00000384016 107 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 RNU6-42P-201ENST00000384165 107 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 MIR583-201ENST00000384846 75 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 Y_RNA.584-201ENST00000391090 114 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 AL590004.2-201ENST00000404787 371 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 AL117342.1-201ENST00000404861 406 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 SNORA79-201ENST00000408376 140 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 AC245047.4-201ENST00000433189 144 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 RPS29P6-201ENST00000438196 145 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 RNU7-94P-201ENST00000459576 63 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 RNU6-197P-201ENST00000516680 100 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 RNU7-172P-201ENST00000517125 64 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 AC090142.3-201ENST00000519012 385 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 AC090049.2-201ENST00000550377 109 ntBASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LRFN3Q9BTN0 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
LRFN3Q9BTN0 Y_RNA.294-201ENST00000364916 102 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms