Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PTPN18Q99952 SNORA26.9-201ENST00000391322 122 ntBASIC2.61□□□□□ -1.99
PTPN18Q99952 SRIP3-201ENST00000413200 219 ntBASIC2.61□□□□□ -1.99
PTPN18Q99952 MLLT10P1-201ENST00000418346 262 ntBASIC2.61□□□□□ -1.99
PTPN18Q99952 AC123900.1-201ENST00000420390 96 ntBASIC2.61□□□□□ -1.99
PTPN18Q99952 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.61□□□□□ -1.99
PTPN18Q99952 MIR4438-201ENST00000585271 93 ntBASIC2.61□□□□□ -1.99
PTPN18Q99952 AL670379.3-201ENST00000605040 251 ntBASIC2.61□□□□□ -1.99
PTPN18Q99952 U2.20-201ENST00000613956 192 ntBASIC2.61□□□□□ -1.99
PTPN18Q99952 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.61□□□□□ -1.99
PTPN18Q99952 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.61□□□□□ -1.99
PTPN18Q99952 RNU1-17P-201ENST00000363022 152 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 RNU1-96P-201ENST00000364163 162 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 Y_RNA.226-201ENST00000364337 114 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 SNORD58C-201ENST00000365223 64 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 Y_RNA.332-201ENST00000365271 113 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 RNU1-109P-201ENST00000383960 147 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 MIR891A-201ENST00000401237 79 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 RNU2-48P-201ENST00000410694 191 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 RPS26P45-201ENST00000471748 340 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 OR9P1P-201ENST00000496431 281 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 RNU7-172P-201ENST00000517125 64 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 AC011604.1-201ENST00000545978 196 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 MTND5P34-201ENST00000568888 325 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 U6.73-201ENST00000619194 103 ntBASIC2.6□□□□□ -1.99
PTPN18Q99952 Y_RNA.66-201ENST00000362862 102 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 Y_RNA.309-201ENST00000365046 111 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 SNORA22-201ENST00000383907 134 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 Y_RNA.630-201ENST00000411370 108 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 EDDM3CP-201ENST00000415977 425 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 RN7SL297P-201ENST00000483161 293 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 Y_RNA.690-201ENST00000516603 95 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 RNU7-149P-201ENST00000516739 59 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 RNU6-856P-201ENST00000516959 98 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 AC133485.4-201ENST00000561835 220 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 AC138907.4-201ENST00000570107 226 ntBASIC2.59□□□□□ -1.99
PTPN18Q99952 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
PTPN18Q99952 MIR21-201ENST00000362134 72 ntBASIC2.58□□□□□ -2
PTPN18Q99952 MIR520G-201ENST00000385064 90 ntBASIC2.58□□□□□ -2
PTPN18Q99952 RNA5SP127-201ENST00000411051 133 ntBASIC2.58□□□□□ -2
PTPN18Q99952 RNA5SP344-201ENST00000411081 104 ntBASIC2.58□□□□□ -2
PTPN18Q99952 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.58□□□□□ -2
PTPN18Q99952 AC108081.1-201ENST00000604358 221 ntBASIC2.58□□□□□ -2
PTPN18Q99952 Pinc.1-201ENST00000616452 154 ntBASIC2.58□□□□□ -2
PTPN18Q99952 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PTPN18Q99952 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
PTPN18Q99952 AL391516.1-201ENST00000554380 2449 ntBASIC2.58□□□□□ -2
PTPN18Q99952 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PTPN18Q99952 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.57□□□□□ -2
PTPN18Q99952 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PTPN18Q99952 VTRNA1-1-201ENST00000363120 99 ntBASIC2.57□□□□□ -2
PTPN18Q99952 RNU6-1292P-201ENST00000383856 107 ntBASIC2.57□□□□□ -2
PTPN18Q99952 RNU6-147P-201ENST00000383983 107 ntBASIC2.57□□□□□ -2
PTPN18Q99952 Y_RNA.486-201ENST00000384398 107 ntBASIC2.57□□□□□ -2
PTPN18Q99952 SNORA11.4-201ENST00000408823 129 ntBASIC2.57□□□□□ -2
PTPN18Q99952 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.57□□□□□ -2
PTPN18Q99952 RN7SKP19-201ENST00000516016 252 ntBASIC2.57□□□□□ -2
PTPN18Q99952 SNORD33.1-201ENST00000516213 88 ntBASIC2.57□□□□□ -2
PTPN18Q99952 RNA5SP170-201ENST00000517150 101 ntBASIC2.57□□□□□ -2
PTPN18Q99952 MIR4498-201ENST00000577599 66 ntBASIC2.57□□□□□ -2
PTPN18Q99952 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PTPN18Q99952 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
PTPN18Q99952 MTND5P32-201ENST00000560711 1802 ntBASIC2.56□□□□□ -2
PTPN18Q99952 Y_RNA.52-201ENST00000362760 96 ntBASIC2.56□□□□□ -2
PTPN18Q99952 Y_RNA.99-201ENST00000363138 105 ntBASIC2.56□□□□□ -2
PTPN18Q99952 RNU6-309P-201ENST00000364573 106 ntBASIC2.56□□□□□ -2
PTPN18Q99952 Y_RNA.346-201ENST00000365385 112 ntBASIC2.56□□□□□ -2
PTPN18Q99952 SNORD116-21-201ENST00000384507 92 ntBASIC2.56□□□□□ -2
PTPN18Q99952 RNU6-160P-201ENST00000384591 107 ntBASIC2.56□□□□□ -2
PTPN18Q99952 RNU11-5P-201ENST00000391216 129 ntBASIC2.56□□□□□ -2
PTPN18Q99952 MIR1253-201ENST00000408273 105 ntBASIC2.56□□□□□ -2
PTPN18Q99952 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.56□□□□□ -2
PTPN18Q99952 AL445646.1-201ENST00000431784 216 ntBASIC2.56□□□□□ -2
PTPN18Q99952 MTATP6P21-201ENST00000440681 189 ntBASIC2.56□□□□□ -2
PTPN18Q99952 SNORA18.4-201ENST00000516440 124 ntBASIC2.56□□□□□ -2
PTPN18Q99952 RNU6-504P-201ENST00000516568 104 ntBASIC2.56□□□□□ -2
PTPN18Q99952 RNU6-365P-201ENST00000517113 106 ntBASIC2.56□□□□□ -2
PTPN18Q99952 AC007751.1-201ENST00000529260 376 ntBASIC2.56□□□□□ -2
PTPN18Q99952 MIR6845-201ENST00000613182 61 ntBASIC2.56□□□□□ -2
PTPN18Q99952 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.56□□□□□ -2
PTPN18Q99952 MIR6766-201ENST00000622641 72 ntBASIC2.56□□□□□ -2
PTPN18Q99952 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.56□□□□□ -2
PTPN18Q99952 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.56□□□□□ -2
PTPN18Q99952 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.55□□□□□ -2
PTPN18Q99952 MIR340-201ENST00000362125 95 ntBASIC2.55□□□□□ -2
PTPN18Q99952 RNU6-1164P-201ENST00000364428 107 ntBASIC2.55□□□□□ -2
PTPN18Q99952 RNU1-148P-201ENST00000384472 162 ntBASIC2.55□□□□□ -2
PTPN18Q99952 MIR548A3-201ENST00000385297 97 ntBASIC2.55□□□□□ -2
PTPN18Q99952 SNORD88.1-201ENST00000408684 91 ntBASIC2.55□□□□□ -2
PTPN18Q99952 Y_RNA.651-201ENST00000459380 103 ntBASIC2.55□□□□□ -2
PTPN18Q99952 RNU6-1061P-201ENST00000516530 99 ntBASIC2.55□□□□□ -2
PTPN18Q99952 AC022202.1-201ENST00000613515 211 ntBASIC2.55□□□□□ -2
PTPN18Q99952 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.55□□□□□ -2
PTPN18Q99952 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PTPN18Q99952 MIR1262-201ENST00000408276 93 ntBASIC2.54□□□□□ -2
PTPN18Q99952 RNA5SP270-201ENST00000411361 118 ntBASIC2.54□□□□□ -2
PTPN18Q99952 RNU7-99P-201ENST00000516271 62 ntBASIC2.54□□□□□ -2
PTPN18Q99952 RNU6-1146P-201ENST00000516282 102 ntBASIC2.54□□□□□ -2
PTPN18Q99952 RNU6-1096P-201ENST00000517089 102 ntBASIC2.54□□□□□ -2
PTPN18Q99952 AL358944.1-201ENST00000528537 144 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms