Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC095038.3-201ENST00000634439 195 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 MIR424-201ENST00000362227 98 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 RNU6-1123P-201ENST00000362347 106 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 SNORD14E-201ENST00000364009 85 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 Y_RNA.200-201ENST00000364018 102 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 RNU6-923P-201ENST00000364753 107 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 RNY4P28-201ENST00000365281 93 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 Y_RNA.572-201ENST00000384757 98 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 MIR626-201ENST00000385032 94 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 Y_RNA.587-201ENST00000391210 103 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 MIR1298-201ENST00000408783 112 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 Y_RNA.626-201ENST00000411288 95 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.71□□□□□ -2.14
NPAS1Q99742 HSPE1P24-201ENST00000450782 238 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 AC093850.1-201ENST00000454121 251 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 HMGN2P23-201ENST00000456759 269 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.71□□□□□ -2.14
NPAS1Q99742 CYCTP-201ENST00000504253 315 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 AC114811.1-201ENST00000507207 168 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 SNORD45.4-201ENST00000516629 73 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 AC103810.8-201ENST00000607347 118 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
NPAS1Q99742 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
NPAS1Q99742 AC068700.1-201ENST00000565862 3754 ntBASIC1.71□□□□□ -2.14
NPAS1Q99742 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NPAS1Q99742 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NPAS1Q99742 Y_RNA.83-201ENST00000363005 113 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 RNU6-424P-201ENST00000384367 105 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 MIR513A1-201ENST00000385138 129 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 MIR660-201ENST00000385235 97 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 RNU6-493P-201ENST00000391321 108 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 MIR891A-201ENST00000401237 79 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 AC245047.8-201ENST00000456455 284 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 snoU13.26-201ENST00000459452 105 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 AC099513.1-201ENST00000490423 301 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.7□□□□□ -2.14
NPAS1Q99742 MIR5688-201ENST00000580619 83 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 AC141273.2-201ENST00000618989 130 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 AC106754.2-201ENST00000623006 233 ntBASIC1.7□□□□□ -2.14
NPAS1Q99742 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.7□□□□□ -2.14
NPAS1Q99742 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NPAS1Q99742 RNU4-17P-201ENST00000365598 141 ntBASIC1.69□□□□□ -2.14
NPAS1Q99742 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
NPAS1Q99742 U8.13-201ENST00000390842 128 ntBASIC1.69□□□□□ -2.14
NPAS1Q99742 SNORA40.18-201ENST00000391200 128 ntBASIC1.69□□□□□ -2.14
NPAS1Q99742 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
NPAS1Q99742 AC100767.1-201ENST00000528178 123 ntBASIC1.69□□□□□ -2.14
NPAS1Q99742 AC090425.1-201ENST00000610007 140 ntBASIC1.69□□□□□ -2.14
NPAS1Q99742 MIR6845-201ENST00000613182 61 ntBASIC1.69□□□□□ -2.14
NPAS1Q99742 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NPAS1Q99742 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
NPAS1Q99742 Y_RNA.229-201ENST00000364347 113 ntBASIC1.68□□□□□ -2.14
NPAS1Q99742 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.68□□□□□ -2.14
NPAS1Q99742 AC005908.1-201ENST00000468701 347 ntBASIC1.68□□□□□ -2.14
NPAS1Q99742 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.68□□□□□ -2.14
NPAS1Q99742 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.68□□□□□ -2.14
NPAS1Q99742 uc_338.4-201ENST00000616635 176 ntBASIC1.68□□□□□ -2.14
NPAS1Q99742 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
NPAS1Q99742 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 ZNF355P-201ENST00000427301 3216 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 AC092881.1-201ENST00000638218 2733 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 Y_RNA.242-201ENST00000364473 110 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 U8.5-201ENST00000364528 136 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 SNORD50B-201ENST00000364995 70 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 SNORD58.1-201ENST00000391313 66 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 RN7SKP51-201ENST00000410781 304 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 CYCSP49-201ENST00000420810 319 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 COX6CP14-201ENST00000469580 174 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.67□□□□□ -2.14
NPAS1Q99742 MIR4762-201ENST00000585261 75 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 AC087685.1-201ENST00000587507 141 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 Pinc.1-201ENST00000616452 154 ntBASIC1.67□□□□□ -2.14
NPAS1Q99742 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NPAS1Q99742 RNU6-653P-201ENST00000363074 106 ntBASIC1.66□□□□□ -2.14
NPAS1Q99742 RNU6-442P-201ENST00000383968 104 ntBASIC1.66□□□□□ -2.14
NPAS1Q99742 MT-TT-201ENST00000387460 66 ntBASIC1.66□□□□□ -2.14
NPAS1Q99742 AL161935.2-201ENST00000414627 60 ntBASIC1.66□□□□□ -2.14
NPAS1Q99742 HMGN2P32-201ENST00000444648 269 ntBASIC1.66□□□□□ -2.14
NPAS1Q99742 NDUFA4P2-201ENST00000489989 244 ntBASIC1.66□□□□□ -2.14
NPAS1Q99742 RNU7-149P-201ENST00000516739 59 ntBASIC1.66□□□□□ -2.14
NPAS1Q99742 MIR3198-2-201ENST00000577868 80 ntBASIC1.66□□□□□ -2.14
NPAS1Q99742 SNORA77B-201ENST00000578179 125 ntBASIC1.66□□□□□ -2.14
NPAS1Q99742 AC027279.3-201ENST00000625055 122 ntBASIC1.66□□□□□ -2.14
NPAS1Q99742 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NPAS1Q99742 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
NPAS1Q99742 MIRLET7C-201ENST00000362160 84 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 RNU6-199P-201ENST00000362954 107 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 RNU6-833P-201ENST00000363486 107 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 Y_RNA.257-201ENST00000364596 102 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 MIR764-201ENST00000390811 85 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 Y_RNA.622-201ENST00000411091 108 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 RNU6-847P-201ENST00000411115 108 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 RN7SKP101-201ENST00000411376 320 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.65□□□□□ -2.15
NPAS1Q99742 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.65□□□□□ -2.15
NPAS1Q99742 SNORD11-201ENST00000459124 84 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.65□□□□□ -2.15
NPAS1Q99742 RN7SKP164-201ENST00000516138 266 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.65□□□□□ -2.15
NPAS1Q99742 AC130289.1-201ENST00000577321 73 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms