Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 RNU6-442P-201ENST00000383968 104 ntBASIC1.35□□□□□ -2.19
GFI1Q99684 AL603910.2-201ENST00000407268 136 ntBASIC1.35□□□□□ -2.19
GFI1Q99684 MIR1298-201ENST00000408783 112 ntBASIC1.35□□□□□ -2.19
GFI1Q99684 RNU2-38P-201ENST00000410856 79 ntBASIC1.35□□□□□ -2.19
GFI1Q99684 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.35□□□□□ -2.19
GFI1Q99684 SNORD2.1-201ENST00000458762 69 ntBASIC1.35□□□□□ -2.19
GFI1Q99684 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.35□□□□□ -2.19
GFI1Q99684 Y_RNA.668-201ENST00000516233 93 ntBASIC1.35□□□□□ -2.19
GFI1Q99684 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.35□□□□□ -2.19
GFI1Q99684 AC062037.2-201ENST00000610137 73 ntBASIC1.35□□□□□ -2.19
GFI1Q99684 GHRLOS.1-201ENST00000610995 70 ntBASIC1.35□□□□□ -2.19
GFI1Q99684 7SK.10-201ENST00000621414 298 ntBASIC1.35□□□□□ -2.19
GFI1Q99684 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.35□□□□□ -2.19
GFI1Q99684 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
GFI1Q99684 Y_RNA.54-201ENST00000362766 105 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 Y_RNA.193-201ENST00000363979 102 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 RNU6-463P-201ENST00000384340 107 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 Y_RNA.478-201ENST00000384358 107 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 Y_RNA.562-201ENST00000384695 113 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 MIR136-201ENST00000385207 82 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 MIR1278-201ENST00000408753 81 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 RNU6-383P-201ENST00000410864 94 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 RPS27P16-201ENST00000425758 201 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 SNORD11-201ENST00000459124 84 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 NDUFA4P2-201ENST00000489989 244 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 AL512310.8-201ENST00000550183 120 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 MIR4255-201ENST00000579351 72 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 MIR4282-201ENST00000583613 67 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 AP001485.1-201ENST00000604799 199 ntBASIC1.34□□□□□ -2.19
GFI1Q99684 Y_RNA.122-201ENST00000363331 96 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 Y_RNA.416-201ENST00000384014 113 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 Y_RNA.452-201ENST00000384202 108 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 SNORD38C-201ENST00000384381 69 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 RNU6-917P-201ENST00000516294 104 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 RNU6-126P-201ENST00000516685 103 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 MIR3664-201ENST00000579074 99 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 MIR4648-201ENST00000580107 72 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 MIR4503-201ENST00000582187 83 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 AC008507.4-201ENST00000585464 127 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 FAM106DP-201ENST00000586416 501 ntBASIC1.33□□□□□ -2.2
GFI1Q99684 Y_RNA.144-201ENST00000363521 113 ntBASIC1.32□□□□□ -2.2
GFI1Q99684 Y_RNA.350-201ENST00000365409 98 ntBASIC1.32□□□□□ -2.2
GFI1Q99684 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
GFI1Q99684 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
GFI1Q99684 AC015922.2-201ENST00000435593 184 ntBASIC1.32□□□□□ -2.2
GFI1Q99684 Y_RNA.638-201ENST00000459374 113 ntBASIC1.32□□□□□ -2.2
GFI1Q99684 RNU6-970P-201ENST00000516312 107 ntBASIC1.32□□□□□ -2.2
GFI1Q99684 RNU6-922P-201ENST00000516753 99 ntBASIC1.32□□□□□ -2.2
GFI1Q99684 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.32□□□□□ -2.2
GFI1Q99684 MIR3149-201ENST00000584629 83 ntBASIC1.32□□□□□ -2.2
GFI1Q99684 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.32□□□□□ -2.2
GFI1Q99684 uc_338.4-201ENST00000616635 176 ntBASIC1.32□□□□□ -2.2
GFI1Q99684 Y_RNA.277-201ENST00000364754 102 ntBASIC1.31□□□□□ -2.2
GFI1Q99684 MIR526A1-201ENST00000384897 85 ntBASIC1.31□□□□□ -2.2
GFI1Q99684 MIR626-201ENST00000385032 94 ntBASIC1.31□□□□□ -2.2
GFI1Q99684 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
GFI1Q99684 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.31□□□□□ -2.2
GFI1Q99684 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.31□□□□□ -2.2
GFI1Q99684 RPL39P39-201ENST00000455840 151 ntBASIC1.31□□□□□ -2.2
GFI1Q99684 AC004817.2-201ENST00000561794 651 ntBASIC1.31□□□□□ -2.2
GFI1Q99684 MIR4662B-201ENST00000579498 81 ntBASIC1.31□□□□□ -2.2
GFI1Q99684 AL021707.8-201ENST00000609428 183 ntBASIC1.31□□□□□ -2.2
GFI1Q99684 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.31□□□□□ -2.2
GFI1Q99684 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.3□□□□□ -2.2
GFI1Q99684 Y_RNA.24-201ENST00000362508 103 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 Y_RNA.304-201ENST00000365011 112 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 MIR583-201ENST00000384846 75 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 AL627390.1-201ENST00000396055 340 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 COX6CP14-201ENST00000469580 174 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 RN7SKP88-201ENST00000516847 250 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 AC090142.3-201ENST00000519012 385 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 AC100767.1-201ENST00000528178 123 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 7SK.8-201ENST00000612110 250 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 AL442067.1-201ENST00000613261 223 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 7SK.11-201ENST00000615477 250 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 7SK.13-201ENST00000622040 250 ntBASIC1.3□□□□□ -2.2
GFI1Q99684 Y_RNA.262-201ENST00000364641 102 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 RNU6-1138P-201ENST00000365359 106 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 RNU6-997P-201ENST00000384725 107 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 U8.13-201ENST00000390842 128 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 snosnR66.1-201ENST00000391095 99 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 RNU6-651P-201ENST00000411040 105 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.29□□□□□ -2.2
GFI1Q99684 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.29□□□□□ -2.2
GFI1Q99684 RNU7-149P-201ENST00000516739 59 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 AL049861.1-201ENST00000603130 150 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 BX248123.2-201ENST00000606318 124 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 MIR6845-201ENST00000613182 61 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
GFI1Q99684 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 MIR8065-201ENST00000620577 100 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 SCARNA15.3-201ENST00000626315 122 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 SCARNA4.1-201ENST00000628597 123 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 AC068700.1-201ENST00000565862 3754 ntBASIC1.29□□□□□ -2.2
GFI1Q99684 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
GFI1Q99684 Y_RNA.20-201ENST00000362479 113 ntBASIC1.28□□□□□ -2.2
GFI1Q99684 RNU4-10P-201ENST00000364383 140 ntBASIC1.28□□□□□ -2.2
GFI1Q99684 RNY3P5-201ENST00000384127 102 ntBASIC1.28□□□□□ -2.2
GFI1Q99684 MIR504-201ENST00000385065 83 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms