Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 MIR1244-4-202ENST00000636813 85 ntBASIC-0.04□□□□□ -2.42
VAT1Q99536 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 SNORD114-9-201ENST00000364370 72 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 SNORA8.2-201ENST00000384372 139 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 RNU2-16P-201ENST00000410712 136 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 RNU6-966P-201ENST00000516479 104 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 RNU6-314P-201ENST00000516574 104 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.05□□□□□ -2.42
VAT1Q99536 AC008608.1-201ENST00000603910 127 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 uc_338.16-201ENST00000621804 95 ntBASIC-0.05□□□□□ -2.42
VAT1Q99536 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
VAT1Q99536 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
VAT1Q99536 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.06□□□□□ -2.42
VAT1Q99536 MIR489-201ENST00000384923 84 ntBASIC-0.06□□□□□ -2.42
VAT1Q99536 RNA5SP63-201ENST00000391225 112 ntBASIC-0.06□□□□□ -2.42
VAT1Q99536 RNU6-847P-201ENST00000411115 108 ntBASIC-0.06□□□□□ -2.42
VAT1Q99536 AC090844.1-201ENST00000422019 156 ntBASIC-0.06□□□□□ -2.42
VAT1Q99536 RNU6-155P-201ENST00000516347 100 ntBASIC-0.06□□□□□ -2.42
VAT1Q99536 AC112693.2-201ENST00000556538 232 ntBASIC-0.06□□□□□ -2.42
VAT1Q99536 uc_338.6-201ENST00000613544 171 ntBASIC-0.06□□□□□ -2.42
VAT1Q99536 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 RNA5SP214-201ENST00000363378 118 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 SNORA1.2-201ENST00000365189 134 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 MIR802-201ENST00000390235 94 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 SNORA75.6-201ENST00000391318 127 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 RNU7-62P-201ENST00000458856 62 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 RPL7P42-201ENST00000481005 679 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 AC091959.1-201ENST00000495857 238 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 SCARNA8-201ENST00000515924 131 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 RNU4-49P-201ENST00000516080 140 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 RNU6-506P-201ENST00000516553 94 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 MIR3678-201ENST00000578455 94 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 POLR3GP1-201ENST00000594073 261 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 AC005176.2-201ENST00000596933 147 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.07□□□□□ -2.42
VAT1Q99536 JPX_2.1-201ENST00000614161 69 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 AC092794.2-201ENST00000620933 563 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
VAT1Q99536 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.07□□□□□ -2.42
VAT1Q99536 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 RNU6-593P-201ENST00000364716 112 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 RNU6-20P-201ENST00000384106 107 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 RNU6-601P-201ENST00000384540 107 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 MTND4P28-201ENST00000426217 387 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 MIR2053-201ENST00000459295 91 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 RPL17P19-201ENST00000489069 552 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 RNU7-116P-201ENST00000516940 62 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 MIR8087-201ENST00000612745 78 ntBASIC-0.08□□□□□ -2.42
VAT1Q99536 RNU6-626P-201ENST00000363354 107 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 RNU6-855P-201ENST00000410395 104 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 AC098826.2-201ENST00000452011 651 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 RPL30P15-201ENST00000457129 321 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 RNU7-102P-201ENST00000458948 62 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 SNORA18.4-201ENST00000516440 124 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 RNU4-77P-201ENST00000516692 156 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 AC005730.3-201ENST00000583067 366 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 AC008507.4-201ENST00000585464 127 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 AC015540.1-201ENST00000615828 501 ntBASIC-0.09□□□□□ -2.42
VAT1Q99536 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNY4P14-201ENST00000363656 96 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-99P-201ENST00000364721 107 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-747P-201ENST00000390928 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-241P-201ENST00000391148 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 MIR548K-201ENST00000408406 116 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-447P-201ENST00000410293 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-355P-201ENST00000410427 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-791P-201ENST00000410467 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-705P-201ENST00000410601 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-860P-201ENST00000410860 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RNU6-785P-201ENST00000411324 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 FCF1P4-201ENST00000448326 183 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 RPL23AP91-201ENST00000569211 455 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 AC104408.1-201ENST00000605241 170 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 U6.90-201ENST00000614007 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 AC087588.2-201ENST00000617667 426 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 U6.70-201ENST00000620287 104 ntBASIC-0.1□□□□□ -2.43
VAT1Q99536 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 RNU6-364P-201ENST00000384387 107 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.11□□□□□ -2.43
VAT1Q99536 MIR125B2-201ENST00000385128 89 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms