Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SPINT5P-201ENST00000448174 155 ntBASIC-1.23□□□□□ -2.61
IFT140Q96RY7 RPL39P25-201ENST00000449384 154 ntBASIC-1.23□□□□□ -2.61
IFT140Q96RY7 USP9YP12-201ENST00000450481 570 ntBASIC-1.23□□□□□ -2.61
IFT140Q96RY7 RNU7-67P-201ENST00000459003 62 ntBASIC-1.23□□□□□ -2.61
IFT140Q96RY7 AC107297.1-201ENST00000459991 176 ntBASIC-1.23□□□□□ -2.61
IFT140Q96RY7 SNORA27.4-201ENST00000516650 95 ntBASIC-1.23□□□□□ -2.61
IFT140Q96RY7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.23□□□□□ -2.61
IFT140Q96RY7 POLR3GP1-201ENST00000594073 261 ntBASIC-1.23□□□□□ -2.61
IFT140Q96RY7 AL133255.1-201ENST00000606374 441 ntBASIC-1.23□□□□□ -2.61
IFT140Q96RY7 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 SNORD50.1-201ENST00000362987 71 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RNU6-268P-201ENST00000364174 107 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RNU6-108P-201ENST00000365558 107 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RNU6-10P-201ENST00000384036 107 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 MIR204-201ENST00000385200 110 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RPL7P42-201ENST00000481005 679 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 AC005972.2-201ENST00000604690 348 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 AC087683.2-201ENST00000611384 326 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 AC005609.4-201ENST00000625071 447 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 AC093726.3-201ENST00000637588 150 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RNU6-490P-201ENST00000362985 107 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 SNORD83B-201ENST00000386745 93 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 SNRPGP14-201ENST00000435400 219 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RNU6-765P-201ENST00000516916 99 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 AC063944.3-201ENST00000609969 533 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 MIR8055-201ENST00000610739 97 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 MIR6738-201ENST00000619620 64 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.24□□□□□ -2.61
IFT140Q96RY7 MIR4320-201ENST00000636981 65 ntBASIC-1.24□□□□□ -2.61
IFT140Q96RY7 RNU6-708P-201ENST00000384217 107 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 MIR516B1-201ENST00000385211 90 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.25□□□□□ -2.61
IFT140Q96RY7 MTATP6P18-201ENST00000417994 673 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 RNU2-11P-201ENST00000459191 187 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 MTCO3P38-201ENST00000468910 766 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 AC021146.6-201ENST00000514659 117 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 RNA5SP169-201ENST00000517268 117 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 MTND1P24-201ENST00000552175 861 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 AP001542.1-201ENST00000591314 200 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 AC006566.1-201ENST00000608943 513 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 Z97988.1-201ENST00000637697 135 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 AC073869.9-201ENST00000641610 120 ntBASIC-1.25□□□□□ -2.61
IFT140Q96RY7 RNU4-92P-201ENST00000363783 136 ntBASIC-1.26□□□□□ -2.61
IFT140Q96RY7 SNORA24-201ENST00000384096 131 ntBASIC-1.26□□□□□ -2.61
IFT140Q96RY7 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.26□□□□□ -2.61
IFT140Q96RY7 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.26□□□□□ -2.61
IFT140Q96RY7 RPL30P10-201ENST00000488148 337 ntBASIC-1.26□□□□□ -2.61
IFT140Q96RY7 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.26□□□□□ -2.61
IFT140Q96RY7 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.26□□□□□ -2.61
IFT140Q96RY7 RNU6-958P-201ENST00000516995 106 ntBASIC-1.26□□□□□ -2.61
IFT140Q96RY7 MIR5583-1-201ENST00000580941 59 ntBASIC-1.26□□□□□ -2.61
IFT140Q96RY7 AL158063.1-201ENST00000615349 536 ntBASIC-1.26□□□□□ -2.61
IFT140Q96RY7 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.27□□□□□ -2.61
IFT140Q96RY7 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.27□□□□□ -2.61
IFT140Q96RY7 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.27□□□□□ -2.61
IFT140Q96RY7 MTCO1P29-201ENST00000496868 288 ntBASIC-1.27□□□□□ -2.61
IFT140Q96RY7 MTND5P34-201ENST00000568888 325 ntBASIC-1.27□□□□□ -2.61
IFT140Q96RY7 RNU4-68P-201ENST00000364314 141 ntBASIC-1.28□□□□□ -2.61
IFT140Q96RY7 RNU6-157P-201ENST00000383957 107 ntBASIC-1.28□□□□□ -2.61
IFT140Q96RY7 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.28□□□□□ -2.61
IFT140Q96RY7 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.28□□□□□ -2.61
IFT140Q96RY7 SNORD12C-201ENST00000386307 89 ntBASIC-1.28□□□□□ -2.61
IFT140Q96RY7 RNU6-602P-201ENST00000411155 105 ntBASIC-1.28□□□□□ -2.61
IFT140Q96RY7 AC090616.2-202ENST00000584248 222 ntBASIC-1.28□□□□□ -2.61
IFT140Q96RY7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.29□□□□□ -2.62
IFT140Q96RY7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.29□□□□□ -2.62
IFT140Q96RY7 RNU6-454P-201ENST00000364292 107 ntBASIC-1.3□□□□□ -2.62
IFT140Q96RY7 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.3□□□□□ -2.62
IFT140Q96RY7 RNY4P34-201ENST00000364779 95 ntBASIC-1.3□□□□□ -2.62
IFT140Q96RY7 RNU6-281P-201ENST00000384212 103 ntBASIC-1.3□□□□□ -2.62
IFT140Q96RY7 RNU6-903P-201ENST00000391270 109 ntBASIC-1.3□□□□□ -2.62
IFT140Q96RY7 SNORD110-201ENST00000408189 75 ntBASIC-1.3□□□□□ -2.62
IFT140Q96RY7 RNA5SP475-201ENST00000410568 110 ntBASIC-1.3□□□□□ -2.62
IFT140Q96RY7 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.3□□□□□ -2.62
IFT140Q96RY7 AC134698.4-201ENST00000523451 826 ntBASIC-1.3□□□□□ -2.62
IFT140Q96RY7 RNU6-926P-201ENST00000384075 107 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 BX276092.1-201ENST00000427368 251 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.31□□□□□ -2.62
IFT140Q96RY7 AP003072.1-201ENST00000531740 145 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 SNORA72.6-201ENST00000384520 129 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 RNU6-913P-201ENST00000390913 95 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 AC006210.1-201ENST00000424882 111 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 AC011352.1-201ENST00000512300 793 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 TUSC7.1-201ENST00000610969 165 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 AC006441.5-201ENST00000612680 209 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 AC099654.12-201ENST00000639868 649 ntBASIC-1.31□□□□□ -2.62
IFT140Q96RY7 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.32□□□□□ -2.62
IFT140Q96RY7 SNORA72-201ENST00000384339 132 ntBASIC-1.32□□□□□ -2.62
IFT140Q96RY7 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.32□□□□□ -2.62
IFT140Q96RY7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.32□□□□□ -2.62
IFT140Q96RY7 SNORA25.13-201ENST00000516395 103 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms