Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-890P-201ENST00000384121 107 ntBASIC0.44□□□□□ -2.34
RPRD1AQ96P16 MIR570-201ENST00000384917 97 ntBASIC0.44□□□□□ -2.34
RPRD1AQ96P16 MTND1P2-201ENST00000430604 821 ntBASIC0.44□□□□□ -2.34
RPRD1AQ96P16 AL355375.2-201ENST00000574825 175 ntBASIC0.44□□□□□ -2.34
RPRD1AQ96P16 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
RPRD1AQ96P16 AL355073.2-201ENST00000612106 557 ntBASIC0.44□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.230-201ENST00000364348 109 ntBASIC0.43□□□□□ -2.34
RPRD1AQ96P16 RNU6-708P-201ENST00000384217 107 ntBASIC0.43□□□□□ -2.34
RPRD1AQ96P16 SNORD38C-201ENST00000384381 69 ntBASIC0.43□□□□□ -2.34
RPRD1AQ96P16 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
RPRD1AQ96P16 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.43□□□□□ -2.34
RPRD1AQ96P16 MIR2115-201ENST00000516657 100 ntBASIC0.43□□□□□ -2.34
RPRD1AQ96P16 RN7SL793P-201ENST00000583259 296 ntBASIC0.43□□□□□ -2.34
RPRD1AQ96P16 AC091925.1-201ENST00000623204 462 ntBASIC0.43□□□□□ -2.34
RPRD1AQ96P16 MIR1-1-201ENST00000362147 71 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 RNU6-369P-201ENST00000362515 102 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 RNU6-845P-201ENST00000362578 103 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.168-201ENST00000363740 102 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.203-201ENST00000364106 102 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.310-201ENST00000365063 113 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.540-201ENST00000384638 111 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.605-201ENST00000410577 105 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 PDCL2P1-201ENST00000419302 352 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 SNRPGP14-201ENST00000435400 219 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 RNU6-470P-201ENST00000515954 104 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 RNA5SP480-201ENST00000516840 109 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 POLR3GP1-201ENST00000594073 261 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 U2.1-201ENST00000618978 145 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 AC138305.3-201ENST00000624988 240 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 U6.92-201ENST00000636464 89 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 TPTEP1-208ENST00000636884 213 ntBASIC0.42□□□□□ -2.34
RPRD1AQ96P16 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.36-201ENST00000362602 112 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.279-201ENST00000364763 95 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 RNU6-1175P-201ENST00000365200 107 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.341-201ENST00000365341 102 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 Y_RNA.370-201ENST00000365589 108 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 RNY1P4-201ENST00000384595 115 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 AL590004.1-201ENST00000405321 300 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 RNU6-710P-201ENST00000410424 105 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 MTND1P34-201ENST00000438556 671 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.41□□□□□ -2.34
RPRD1AQ96P16 RNU7-116P-201ENST00000516940 62 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 RN7SKP295-201ENST00000517264 153 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 AC024405.2-202ENST00000532731 184 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 AC104695.3-201ENST00000604052 296 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 AC007742.2-201ENST00000618226 398 ntBASIC0.41□□□□□ -2.34
RPRD1AQ96P16 SNORD114-23-201ENST00000363536 72 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 Y_RNA.166-201ENST00000363730 102 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 RNU4-40P-201ENST00000364351 143 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 Y_RNA.570-201ENST00000384750 101 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 RNU6-177P-201ENST00000411257 104 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 MTCO3P10-201ENST00000455912 772 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 HMGN1P10-201ENST00000474557 553 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 NDUFA4P2-201ENST00000489989 244 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 RN7SKP12-201ENST00000516275 143 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 RNU6-830P-201ENST00000516353 107 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 AC087685.1-201ENST00000587507 141 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 AP003357.1-201ENST00000604497 148 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 Pinc.1-201ENST00000616452 154 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 AL589743.1-201ENST00000551932 2712 ntBASIC0.4□□□□□ -2.35
RPRD1AQ96P16 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
RPRD1AQ96P16 Y_RNA.314-201ENST00000365114 102 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 RNU6-396P-201ENST00000365369 105 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 RNU6-442P-201ENST00000383968 104 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 MIR628-201ENST00000385229 95 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 MIR140-201ENST00000385282 100 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 U8.17-201ENST00000391292 132 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 AF228730.4-201ENST00000421457 183 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 AC005042.3-201ENST00000453230 174 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 snoU13.21-201ENST00000459368 105 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 AC091951.2-201ENST00000500762 203 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 Y_RNA.655-201ENST00000515919 96 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 RNU6-911P-201ENST00000516523 104 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 MIR548AO-201ENST00000579992 96 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 MIR5690-201ENST00000583739 73 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 JPX_2.1-201ENST00000614161 69 ntBASIC0.39□□□□□ -2.35
RPRD1AQ96P16 Y_RNA.27-201ENST00000362540 103 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 RNU6-1209P-201ENST00000363655 107 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 Y_RNA.160-201ENST00000363677 92 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 RNU6-268P-201ENST00000364174 107 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 Y_RNA.456-201ENST00000384232 111 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 SNORA51.10-201ENST00000384418 136 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 MIR573-201ENST00000384964 99 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 AC244023.1-201ENST00000426884 112 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 MTCO2P12-201ENST00000427426 682 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 AC096644.2-201ENST00000429278 159 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.38□□□□□ -2.35
RPRD1AQ96P16 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
RPRD1AQ96P16 RPL23AP54-201ENST00000495129 419 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 AC127455.1-201ENST00000565496 145 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 MIR4423-201ENST00000580922 80 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 DEFB117-201ENST00000602356 141 ntBASIC0.38□□□□□ -2.35
RPRD1AQ96P16 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms