Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 Y_RNA.242-201ENST00000364473 110 ntBASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 SNORD72-201ENST00000390994 80 ntBASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 CST2P1-201ENST00000425770 87 ntBASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 Y_RNA.651-201ENST00000459380 103 ntBASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 SNORA18.4-201ENST00000516440 124 ntBASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 RNA5SP281-201ENST00000516504 135 ntBASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 MIR4648-201ENST00000580107 72 ntBASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.52□□□□□ -2.01
ZSWIM3Q96MP5 RNU6-508P-201ENST00000363231 103 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 SNORA1-201ENST00000384107 130 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 RNU6-443P-201ENST00000384780 107 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 RN7SKP192-201ENST00000411291 327 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 AC104389.3-201ENST00000445629 235 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 RNU1-142P-201ENST00000516682 145 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 AP002004.2-201ENST00000531656 154 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 AC103810.6-201ENST00000606708 136 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 AL591926.4-201ENST00000616895 298 ntBASIC2.51□□□□□ -2.01
ZSWIM3Q96MP5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 SNORA1B-201ENST00000362535 133 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 RNA5SP393-201ENST00000363423 117 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 RNU6-309P-201ENST00000364573 106 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 DEFA7P-201ENST00000382676 285 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 SNORD61-201ENST00000384252 73 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 MIR504-201ENST00000385065 83 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 SNORA12.1-201ENST00000390873 148 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 Y_RNA.621-201ENST00000411065 96 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 Y_RNA.630-201ENST00000411370 108 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 AC009238.1-201ENST00000442165 424 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 AC009237.6-201ENST00000446969 424 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 RNU7-94P-201ENST00000459576 63 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 SNORD33.1-201ENST00000516213 88 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 MIR3169-201ENST00000578032 83 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 MIR4762-201ENST00000585261 75 ntBASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZSWIM3Q96MP5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 U8.5-201ENST00000364528 136 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 SNORD18B-201ENST00000365659 72 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 MIR522-201ENST00000385071 87 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 FTH1P12-201ENST00000432137 551 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 AC233266.1-201ENST00000454518 96 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 UBL5P3-201ENST00000475112 231 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 PDCD5P2-201ENST00000507570 312 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 MIR3129-201ENST00000581095 76 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 AC242852.1-201ENST00000612151 96 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 AC244015.1-201ENST00000622301 99 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 MIR1291-201ENST00000627649 87 ntBASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ZSWIM3Q96MP5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 MIR518F-201ENST00000384973 87 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 AC063976.4-201ENST00000421971 163 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 AF228730.3-201ENST00000436691 102 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 SCARNA15-202ENST00000516881 127 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 AC133485.4-201ENST00000561835 220 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 AC138907.4-201ENST00000570107 226 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 AL049779.4-201ENST00000604500 156 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 AL670379.3-201ENST00000605040 251 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 AL022345.2-201ENST00000606307 135 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 AC022513.1-201ENST00000624512 117 ntBASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZSWIM3Q96MP5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 MIR126-201ENST00000362291 85 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 RNU6-1164P-201ENST00000364428 107 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 SNORA8-201ENST00000384574 139 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 AL356320.1-201ENST00000429616 163 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 AC099677.2-201ENST00000436385 175 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 MTATP6P21-201ENST00000440681 189 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 SNRPGP13-201ENST00000442212 177 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 RNU6-781P-201ENST00000516377 101 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 Y_RNA.714-201ENST00000517065 90 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 MTND5P34-201ENST00000568888 325 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 MIR5092-201ENST00000583139 88 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 FO624990.1-201ENST00000636373 85 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 AC016717.2-201ENST00000609089 5141 ntBASIC2.47□□□□□ -2.01
ZSWIM3Q96MP5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ZSWIM3Q96MP5 SNORA63.4-201ENST00000362763 126 ntBASIC2.46□□□□□ -2.02
ZSWIM3Q96MP5 RNA5SP493-201ENST00000364115 91 ntBASIC2.46□□□□□ -2.02
ZSWIM3Q96MP5 RNA5SP323-201ENST00000391094 133 ntBASIC2.46□□□□□ -2.02
ZSWIM3Q96MP5 SNORD77.3-201ENST00000391113 65 ntBASIC2.46□□□□□ -2.02
ZSWIM3Q96MP5 MIR1289-2-201ENST00000408360 111 ntBASIC2.46□□□□□ -2.02
ZSWIM3Q96MP5 RNA5SP181-201ENST00000410246 98 ntBASIC2.46□□□□□ -2.02
ZSWIM3Q96MP5 RNU7-26P-201ENST00000458980 63 ntBASIC2.46□□□□□ -2.02
ZSWIM3Q96MP5 AL163195.1-201ENST00000496941 348 ntBASIC2.46□□□□□ -2.02
ZSWIM3Q96MP5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms