Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-101P-201ENST00000410323 104 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU6-383P-201ENST00000410864 94 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 POLR2J4-204ENST00000418424 324 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.77□□□□□ -2.29
LINC00477Q96M19 SNRPGP14-201ENST00000435400 219 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 POLR2KP2-201ENST00000438155 177 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 SUMO1P2-201ENST00000452524 304 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU7-41P-201ENST00000515917 61 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 SNORA70.12-201ENST00000516084 153 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU6-947P-201ENST00000516264 106 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNY3P15-201ENST00000516297 97 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 Y_RNA.713-201ENST00000517013 96 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU6-988P-201ENST00000519081 107 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 AL358944.1-201ENST00000528537 144 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 AP003072.1-201ENST00000531740 145 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 AC090049.2-201ENST00000550377 109 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 AC127455.1-201ENST00000565496 145 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 AC044792.1-201ENST00000593294 196 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 SNORD114-21-201ENST00000606412 72 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.77□□□□□ -2.29
LINC00477Q96M19 AC027335.2-201ENST00000624030 375 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 AC091895.1-201ENST00000624494 256 ntBASIC0.77□□□□□ -2.29
LINC00477Q96M19 RNU6-770P-201ENST00000363929 105 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 RNU6-694P-201ENST00000364071 147 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 Y_RNA.203-201ENST00000364106 102 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 Y_RNA.456-201ENST00000384232 111 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 RNU6-163P-201ENST00000384396 106 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
LINC00477Q96M19 MTCO2P33-201ENST00000402100 465 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 HMGN1P7-201ENST00000491722 313 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.76□□□□□ -2.29
LINC00477Q96M19 SNORA31.2-201ENST00000516019 134 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 SNORD45.4-201ENST00000516629 73 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LINC00477Q96M19 AL162424.1-201ENST00000602325 221 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 SNORA28-201ENST00000606769 126 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 AL008718.3-201ENST00000610217 321 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 MIR548AY-201ENST00000617669 107 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 AL138825.1-201ENST00000618587 192 ntBASIC0.76□□□□□ -2.29
LINC00477Q96M19 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LINC00477Q96M19 Y_RNA.84-201ENST00000363011 104 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 SNORA25.3-201ENST00000363205 127 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 RNU6-833P-201ENST00000363486 107 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 Y_RNA.336-201ENST00000365307 109 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 RNU6-969P-201ENST00000383900 105 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 RNU6-1227P-201ENST00000383981 107 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 SNORA25-201ENST00000384384 134 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 MIR891A-201ENST00000401237 79 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 SNORA36B-201ENST00000410438 131 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 RPL23AP54-201ENST00000495129 419 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC00477Q96M19 CYCTP-201ENST00000504253 315 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 SEPT14P8-201ENST00000508026 178 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 RNU7-28P-201ENST00000516759 62 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 RNU6-570P-201ENST00000517051 105 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 AC136628.3-201ENST00000521868 290 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC00477Q96M19 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 AL513534.2-201ENST00000603836 250 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 AL022345.2-201ENST00000606307 135 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 SNORD113-5-201ENST00000607261 78 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 GHRLOS.1-201ENST00000610995 70 ntBASIC0.75□□□□□ -2.29
LINC00477Q96M19 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC00477Q96M19 Y_RNA.117-201ENST00000363294 101 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 Y_RNA.136-201ENST00000363444 102 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 Y_RNA.326-201ENST00000365176 113 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 SNORA2.2-201ENST00000365473 135 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 Y_RNA.569-201ENST00000384749 103 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 MIR570-201ENST00000384917 97 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 MT-TW-201ENST00000387382 68 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 RNU6-910P-201ENST00000390844 107 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 SNORA75.2-201ENST00000391138 150 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 SNORA75.3-201ENST00000391231 150 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 RNU6-985P-201ENST00000410182 104 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 AC245047.8-201ENST00000456455 284 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 SNORD11-201ENST00000459124 84 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 AC091959.1-201ENST00000495857 238 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 SCARNA24.2-201ENST00000516968 130 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 Y_RNA.721-201ENST00000517207 102 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC00477Q96M19 AP003733.2-201ENST00000529409 171 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 AP000942.3-201ENST00000603702 160 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 AP001282.2-201ENST00000616149 309 ntBASIC0.74□□□□□ -2.29
LINC00477Q96M19 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LINC00477Q96M19 SNORD114-27-201ENST00000363766 70 ntBASIC0.73□□□□□ -2.29
LINC00477Q96M19 RNU4-38P-201ENST00000364472 129 ntBASIC0.73□□□□□ -2.29
LINC00477Q96M19 RNU6-290P-201ENST00000365212 101 ntBASIC0.73□□□□□ -2.29
LINC00477Q96M19 MIR1302-7-201ENST00000408841 72 ntBASIC0.73□□□□□ -2.29
LINC00477Q96M19 AC245047.7-201ENST00000440265 293 ntBASIC0.73□□□□□ -2.29
LINC00477Q96M19 SNORA18.7-201ENST00000516910 131 ntBASIC0.73□□□□□ -2.29
LINC00477Q96M19 RPL23AP91-201ENST00000569211 455 ntBASIC0.73□□□□□ -2.29
LINC00477Q96M19 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
LINC00477Q96M19 BX284668.6-201ENST00000606899 438 ntBASIC0.73□□□□□ -2.29
LINC00477Q96M19 AC027279.3-201ENST00000625055 122 ntBASIC0.73□□□□□ -2.29
LINC00477Q96M19 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
LINC00477Q96M19 RNU6-1272P-201ENST00000362776 107 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 Y_RNA.217-201ENST00000364214 105 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 SNORA63C-201ENST00000364578 129 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms