Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AL355073.2-201ENST00000612106 557 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 U2.1-201ENST00000618978 145 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 TPTEP1-208ENST00000636884 213 ntBASIC0.4□□□□□ -2.35
PKNOX2Q96KN3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 RNU4-40P-201ENST00000364351 143 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 RNU1-133P-201ENST00000364867 167 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 RNU6-890P-201ENST00000384121 107 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 RNA5SP95-201ENST00000410319 137 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.599-201ENST00000410489 109 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 RNA5SP222-201ENST00000411039 105 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 RNU6-470P-201ENST00000515954 104 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 POLR3GP1-201ENST00000594073 261 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 AC022709.1-201ENST00000615967 87 ntBASIC0.39□□□□□ -2.35
PKNOX2Q96KN3 RNY1-201ENST00000364228 113 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.279-201ENST00000364763 95 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 RNU6-396P-201ENST00000365369 105 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 RNU6-442P-201ENST00000383968 104 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 FCF1P9-201ENST00000412546 282 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 SNRPGP14-201ENST00000435400 219 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 FGF7P6-202ENST00000451282 293 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 AC005042.3-201ENST00000453230 174 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 RNU6-1132P-201ENST00000459214 107 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 AC012433.1-201ENST00000588916 398 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 AP003357.1-201ENST00000604497 148 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 Pinc.1-201ENST00000616452 154 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 AC138305.3-201ENST00000624988 240 ntBASIC0.38□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.27-201ENST00000362540 103 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 RNU6-1175P-201ENST00000365200 107 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 SNORA36.2-201ENST00000384004 127 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.570-201ENST00000384750 101 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 MIR628-201ENST00000385229 95 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 PDCL2P1-201ENST00000419302 352 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 AC002350.1-201ENST00000490759 375 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.655-201ENST00000515919 96 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 JPX_2.1-201ENST00000614161 69 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 U6.92-201ENST00000636464 89 ntBASIC0.37□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.314-201ENST00000365114 102 ntBASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 MIR598-201ENST00000384868 97 ntBASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 MIR570-201ENST00000384917 97 ntBASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 U8.17-201ENST00000391292 132 ntBASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 RNU6-177P-201ENST00000411257 104 ntBASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 AC091951.2-201ENST00000500762 203 ntBASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 AC024405.2-202ENST00000532731 184 ntBASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 MIR4423-201ENST00000580922 80 ntBASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 AC243829.3-201ENST00000622177 108 ntBASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
PKNOX2Q96KN3 RNU6-369P-201ENST00000362515 102 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.160-201ENST00000363677 92 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 RNU6-268P-201ENST00000364174 107 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.376-201ENST00000365638 108 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 RNU6-708P-201ENST00000384217 107 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 SNORA51.10-201ENST00000384418 136 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 MIR802-201ENST00000390235 94 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 AC099799.1-201ENST00000439809 192 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 HMGN1P10-201ENST00000474557 553 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 AC127455.1-201ENST00000565496 145 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 AC005730.3-201ENST00000583067 366 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 MIR5188-201ENST00000583467 113 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 MIR6513-201ENST00000621188 64 ntBASIC0.35□□□□□ -2.35
PKNOX2Q96KN3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 MIR377-201ENST00000362145 69 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 RNU6-580P-201ENST00000365159 107 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 RNY1P8-201ENST00000383970 114 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 MIR573-201ENST00000384964 99 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 MIR613-201ENST00000385248 95 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 MIR140-201ENST00000385282 100 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 MT-TN-201ENST00000387400 73 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 AL590004.1-201ENST00000405321 300 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 AF228730.4-201ENST00000421457 183 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 MTCO3P10-201ENST00000455912 772 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 Y_RNA.653-201ENST00000459091 95 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 RPL23AP54-201ENST00000495129 419 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 RNU7-115P-201ENST00000516433 55 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 MIR548AO-201ENST00000579992 96 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 MIR5093-201ENST00000583199 100 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 AL512605.2-201ENST00000592972 256 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 AC022306.2-201ENST00000617563 647 ntBASIC0.34□□□□□ -2.36
PKNOX2Q96KN3 RNU6-490P-201ENST00000362985 107 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms