Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 U8.19-201ENST00000459095 133 ntBASIC0.38□□□□□ -2.35
USP47Q96K76 AC011352.1-201ENST00000512300 793 ntBASIC0.38□□□□□ -2.35
USP47Q96K76 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.38□□□□□ -2.35
USP47Q96K76 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.38□□□□□ -2.35
USP47Q96K76 AC087588.2-201ENST00000617667 426 ntBASIC0.38□□□□□ -2.35
USP47Q96K76 SNORD18A-201ENST00000363753 72 ntBASIC0.37□□□□□ -2.35
USP47Q96K76 RNU6-20P-201ENST00000384106 107 ntBASIC0.37□□□□□ -2.35
USP47Q96K76 Y_RNA.446-201ENST00000384178 104 ntBASIC0.37□□□□□ -2.35
USP47Q96K76 Y_RNA.516-201ENST00000384541 124 ntBASIC0.37□□□□□ -2.35
USP47Q96K76 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.37□□□□□ -2.35
USP47Q96K76 CHEK2P4-201ENST00000450340 246 ntBASIC0.37□□□□□ -2.35
USP47Q96K76 RNU6-120P-201ENST00000516077 103 ntBASIC0.37□□□□□ -2.35
USP47Q96K76 RNU6-155P-201ENST00000516347 100 ntBASIC0.37□□□□□ -2.35
USP47Q96K76 RNU4-77P-201ENST00000516692 156 ntBASIC0.37□□□□□ -2.35
USP47Q96K76 AC005176.2-201ENST00000596933 147 ntBASIC0.37□□□□□ -2.35
USP47Q96K76 AL355073.2-201ENST00000612106 557 ntBASIC0.37□□□□□ -2.35
USP47Q96K76 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.37□□□□□ -2.35
USP47Q96K76 MIR570-201ENST00000384917 97 ntBASIC0.36□□□□□ -2.35
USP47Q96K76 MIR329-2-201ENST00000385029 84 ntBASIC0.36□□□□□ -2.35
USP47Q96K76 Y_RNA.592-201ENST00000410274 109 ntBASIC0.36□□□□□ -2.35
USP47Q96K76 RNU6-1156P-201ENST00000410365 100 ntBASIC0.36□□□□□ -2.35
USP47Q96K76 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
USP47Q96K76 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.36□□□□□ -2.35
USP47Q96K76 RPL30P15-201ENST00000457129 321 ntBASIC0.36□□□□□ -2.35
USP47Q96K76 TRBVB-201ENST00000477100 408 ntBASIC0.36□□□□□ -2.35
USP47Q96K76 AC116353.2-201ENST00000505332 712 ntBASIC0.36□□□□□ -2.35
USP47Q96K76 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.36□□□□□ -2.35
USP47Q96K76 RNU6-1213P-201ENST00000517075 94 ntBASIC0.36□□□□□ -2.35
USP47Q96K76 AC090517.2-201ENST00000614966 680 ntBASIC0.36□□□□□ -2.35
USP47Q96K76 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
USP47Q96K76 SNORD14E-201ENST00000364009 85 ntBASIC0.35□□□□□ -2.35
USP47Q96K76 RNA5SP299-201ENST00000391203 116 ntBASIC0.35□□□□□ -2.35
USP47Q96K76 FCF1P4-201ENST00000448326 183 ntBASIC0.35□□□□□ -2.35
USP47Q96K76 RNU6-718P-201ENST00000516166 105 ntBASIC0.35□□□□□ -2.35
USP47Q96K76 AL355375.2-201ENST00000574825 175 ntBASIC0.35□□□□□ -2.35
USP47Q96K76 AC002553.4-201ENST00000616896 331 ntBASIC0.35□□□□□ -2.35
USP47Q96K76 RNU6-767P-201ENST00000384132 107 ntBASIC0.34□□□□□ -2.35
USP47Q96K76 SNORD38C-201ENST00000384381 69 ntBASIC0.34□□□□□ -2.35
USP47Q96K76 Y_RNA.577-201ENST00000384794 101 ntBASIC0.34□□□□□ -2.35
USP47Q96K76 RNU6-192P-201ENST00000391253 100 ntBASIC0.34□□□□□ -2.35
USP47Q96K76 PRDX4P1-201ENST00000507189 574 ntBASIC0.34□□□□□ -2.35
USP47Q96K76 RN7SKP12-201ENST00000516275 143 ntBASIC0.34□□□□□ -2.35
USP47Q96K76 RNU6-966P-201ENST00000516479 104 ntBASIC0.34□□□□□ -2.35
USP47Q96K76 MIR2115-201ENST00000516657 100 ntBASIC0.34□□□□□ -2.35
USP47Q96K76 RNU6-264P-201ENST00000517134 104 ntBASIC0.34□□□□□ -2.35
USP47Q96K76 AC080013.6-201ENST00000606185 215 ntBASIC0.34□□□□□ -2.35
USP47Q96K76 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
USP47Q96K76 RNU6-623P-201ENST00000363143 105 ntBASIC0.33□□□□□ -2.36
USP47Q96K76 RNU6-396P-201ENST00000365369 105 ntBASIC0.33□□□□□ -2.36
USP47Q96K76 MIR548F1-201ENST00000408667 84 ntBASIC0.33□□□□□ -2.36
USP47Q96K76 RNU6-613P-201ENST00000410412 108 ntBASIC0.33□□□□□ -2.36
USP47Q96K76 AC060780.3-201ENST00000589464 80 ntBASIC0.33□□□□□ -2.36
USP47Q96K76 AC011476.5-201ENST00000615594 130 ntBASIC0.33□□□□□ -2.36
USP47Q96K76 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
USP47Q96K76 Y_RNA.329-201ENST00000365209 107 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 AL589823.1-201ENST00000429577 183 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 RNU7-169P-201ENST00000459456 61 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.32□□□□□ -2.36
USP47Q96K76 RNU6-470P-201ENST00000515954 104 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.32□□□□□ -2.36
USP47Q96K76 MIR4636-201ENST00000582271 80 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
USP47Q96K76 POLR3GP1-201ENST00000594073 261 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 AL669831.3-213ENST00000636676 183 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 Y_RNA.72-201ENST00000362894 103 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 Y_RNA.168-201ENST00000363740 102 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 Y_RNA.390-201ENST00000383932 102 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 Pinc.1-201ENST00000616452 154 ntBASIC0.32□□□□□ -2.36
USP47Q96K76 Y_RNA.146-201ENST00000363549 102 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 RNY3P11-201ENST00000364153 102 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 RNU6-1323P-201ENST00000384025 107 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 U8.17-201ENST00000391292 132 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 MIR1277-201ENST00000408536 78 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 MIR1912-201ENST00000410389 80 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 RNU6-855P-201ENST00000410395 104 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 RNU6-177P-201ENST00000411257 104 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
USP47Q96K76 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.31□□□□□ -2.36
USP47Q96K76 RNU7-30P-201ENST00000516835 62 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 AC144568.1-201ENST00000520139 137 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 MIR548AO-201ENST00000579992 96 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 MIR4659A-201ENST00000580269 81 ntBASIC0.31□□□□□ -2.36
USP47Q96K76 RNU6-369P-201ENST00000362515 102 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 Y_RNA.60-201ENST00000362831 98 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 Y_RNA.203-201ENST00000364106 102 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 Y_RNA.341-201ENST00000365341 102 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 Y_RNA.370-201ENST00000365589 108 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 RNY3P4-201ENST00000384428 101 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 RNU6-1215P-201ENST00000384441 102 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 MIR573-201ENST00000384964 99 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 SNORD78.2-201ENST00000391076 69 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 MIR1265-201ENST00000408444 86 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 Y_RNA.605-201ENST00000410577 105 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 MCFD2P1-201ENST00000417812 300 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.3□□□□□ -2.36
USP47Q96K76 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.3□□□□□ -2.36
USP47Q96K76 RNU6-830P-201ENST00000516353 107 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms