Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC233266.1-201ENST00000454518 96 ntBASIC2.61□□□□□ -1.99
CHAMP1Q96JM3 AC234781.5-201ENST00000508429 271 ntBASIC2.61□□□□□ -1.99
CHAMP1Q96JM3 MIR4498-201ENST00000577599 66 ntBASIC2.61□□□□□ -1.99
CHAMP1Q96JM3 AC026271.5-201ENST00000577873 130 ntBASIC2.61□□□□□ -1.99
CHAMP1Q96JM3 AC242852.1-201ENST00000612151 96 ntBASIC2.61□□□□□ -1.99
CHAMP1Q96JM3 Pinc.1-201ENST00000616452 154 ntBASIC2.61□□□□□ -1.99
CHAMP1Q96JM3 AC244015.1-201ENST00000622301 99 ntBASIC2.61□□□□□ -1.99
CHAMP1Q96JM3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.61□□□□□ -1.99
CHAMP1Q96JM3 SNORA1B-201ENST00000362535 133 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 RNU6-23P-201ENST00000363283 107 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 SNORD56.5-201ENST00000364281 72 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 MIR518E-201ENST00000385252 88 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 RNU6-460P-201ENST00000391158 108 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 AL356320.1-201ENST00000429616 163 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 AL606517.2-201ENST00000442855 241 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 OR9P1P-201ENST00000496431 281 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 RNU6-479P-201ENST00000516348 105 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 AC022217.4-201ENST00000604389 163 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 JPX_2.1-201ENST00000614161 69 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 AP001340.1-201ENST00000624405 217 ntBASIC2.6□□□□□ -1.99
CHAMP1Q96JM3 RNU1-58P-201ENST00000362413 163 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 Y_RNA.218-201ENST00000364218 104 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 RNA5SP160-201ENST00000364866 120 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 BX510359.4-201ENST00000423750 193 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 SNRPGP10-201ENST00000432323 225 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 AC023449.1-201ENST00000454464 154 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 RNU6-971P-201ENST00000516920 106 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 MIR4446-201ENST00000578505 67 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 AL365222.1-201ENST00000614661 98 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 AL591926.4-201ENST00000616895 298 ntBASIC2.59□□□□□ -1.99
CHAMP1Q96JM3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
CHAMP1Q96JM3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
CHAMP1Q96JM3 RNU6-1081P-201ENST00000384537 107 ntBASIC2.58□□□□□ -2
CHAMP1Q96JM3 MIR29C-201ENST00000385231 88 ntBASIC2.58□□□□□ -2
CHAMP1Q96JM3 RNU6-1168P-201ENST00000390831 104 ntBASIC2.58□□□□□ -2
CHAMP1Q96JM3 RNA5SP323-201ENST00000391094 133 ntBASIC2.58□□□□□ -2
CHAMP1Q96JM3 RNU2-51P-201ENST00000410708 197 ntBASIC2.58□□□□□ -2
CHAMP1Q96JM3 snoU13.18-201ENST00000459483 104 ntBASIC2.58□□□□□ -2
CHAMP1Q96JM3 MRPS17P9-201ENST00000511924 393 ntBASIC2.58□□□□□ -2
CHAMP1Q96JM3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.58□□□□□ -2
CHAMP1Q96JM3 AL049779.4-201ENST00000604500 156 ntBASIC2.58□□□□□ -2
CHAMP1Q96JM3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.58□□□□□ -2
CHAMP1Q96JM3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHAMP1Q96JM3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHAMP1Q96JM3 SNORD115-3-201ENST00000363100 82 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 MIR499A-201ENST00000384903 122 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 SNORA12.1-201ENST00000390873 148 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 SNORD72-201ENST00000390994 80 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 MIR1283-2-201ENST00000408621 87 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 RNU2-70P-201ENST00000410718 179 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 AC245047.4-201ENST00000433189 144 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 RNU7-94P-201ENST00000459576 63 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 RNA5SP137-201ENST00000516833 135 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 AP002004.2-201ENST00000531656 154 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 MIR4662B-201ENST00000579498 81 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 MIR548AI-201ENST00000579940 88 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 MIR4658-201ENST00000584344 65 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 AC008507.4-201ENST00000585464 127 ntBASIC2.57□□□□□ -2
CHAMP1Q96JM3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHAMP1Q96JM3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CHAMP1Q96JM3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CHAMP1Q96JM3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CHAMP1Q96JM3 MIR522-201ENST00000385071 87 ntBASIC2.56□□□□□ -2
CHAMP1Q96JM3 MIR221-201ENST00000385135 110 ntBASIC2.56□□□□□ -2
CHAMP1Q96JM3 RNU6-62P-201ENST00000516526 102 ntBASIC2.56□□□□□ -2
CHAMP1Q96JM3 MIR5007-201ENST00000583098 95 ntBASIC2.56□□□□□ -2
CHAMP1Q96JM3 AC005786.1-201ENST00000588553 154 ntBASIC2.56□□□□□ -2
CHAMP1Q96JM3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
CHAMP1Q96JM3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHAMP1Q96JM3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHAMP1Q96JM3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHAMP1Q96JM3 Y_RNA.71-201ENST00000362892 104 ntBASIC2.55□□□□□ -2
CHAMP1Q96JM3 SNORA22C-201ENST00000384614 134 ntBASIC2.55□□□□□ -2
CHAMP1Q96JM3 FTH1P12-201ENST00000432137 551 ntBASIC2.55□□□□□ -2
CHAMP1Q96JM3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.55□□□□□ -2
CHAMP1Q96JM3 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
CHAMP1Q96JM3 AL049830.1-201ENST00000468034 425 ntBASIC2.55□□□□□ -2
CHAMP1Q96JM3 RNU6-126P-201ENST00000516685 103 ntBASIC2.55□□□□□ -2
CHAMP1Q96JM3 AC007751.1-201ENST00000529260 376 ntBASIC2.55□□□□□ -2
CHAMP1Q96JM3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.55□□□□□ -2
CHAMP1Q96JM3 MIR1273D-201ENST00000577266 86 ntBASIC2.55□□□□□ -2
CHAMP1Q96JM3 MIR3126-201ENST00000577443 74 ntBASIC2.55□□□□□ -2
CHAMP1Q96JM3 MIR6873-201ENST00000622788 63 ntBASIC2.55□□□□□ -2
CHAMP1Q96JM3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
CHAMP1Q96JM3 MIR126-201ENST00000362291 85 ntBASIC2.54□□□□□ -2
CHAMP1Q96JM3 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
CHAMP1Q96JM3 SNORA25.7-201ENST00000364375 127 ntBASIC2.54□□□□□ -2
CHAMP1Q96JM3 SNORA26-201ENST00000391286 122 ntBASIC2.54□□□□□ -2
CHAMP1Q96JM3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.54□□□□□ -2
CHAMP1Q96JM3 RNU6-717P-201ENST00000459076 104 ntBASIC2.54□□□□□ -2
CHAMP1Q96JM3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.54□□□□□ -2
CHAMP1Q96JM3 RNA5SP281-201ENST00000516504 135 ntBASIC2.54□□□□□ -2
CHAMP1Q96JM3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.54□□□□□ -2
CHAMP1Q96JM3 MIR4762-201ENST00000585261 75 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 240.3 ms