Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.72-201ENST00000362894 103 ntBASIC0.3□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.230-201ENST00000364348 109 ntBASIC0.3□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.310-201ENST00000365063 113 ntBASIC0.3□□□□□ -2.36
ECHDC3Q96DC8 MIR625-201ENST00000385047 85 ntBASIC0.3□□□□□ -2.36
ECHDC3Q96DC8 RPL30P15-201ENST00000457129 321 ntBASIC0.3□□□□□ -2.36
ECHDC3Q96DC8 RNU6-155P-201ENST00000516347 100 ntBASIC0.3□□□□□ -2.36
ECHDC3Q96DC8 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
ECHDC3Q96DC8 AL669831.3-213ENST00000636676 183 ntBASIC0.3□□□□□ -2.36
ECHDC3Q96DC8 SNORD14E-201ENST00000364009 85 ntBASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 RNU6-396P-201ENST00000365369 105 ntBASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 SNORD38C-201ENST00000384381 69 ntBASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 MIR548F1-201ENST00000408667 84 ntBASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 MCFD2P1-201ENST00000417812 300 ntBASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 RNU6-120P-201ENST00000516077 103 ntBASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 SNORA62.5-201ENST00000516634 120 ntBASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 RNU7-116P-201ENST00000516940 62 ntBASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 RNU6-1213P-201ENST00000517075 94 ntBASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 Pinc.1-201ENST00000616452 154 ntBASIC0.29□□□□□ -2.36
ECHDC3Q96DC8 SNORD45.3-201ENST00000363836 72 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 RNU6-324P-201ENST00000363957 106 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.203-201ENST00000364106 102 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 Y_RNA.537-201ENST00000384626 109 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 SNORD78.2-201ENST00000391076 69 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 SNORA75.6-201ENST00000391318 127 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 RNU6-710P-201ENST00000410424 105 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 RNU4-14P-201ENST00000410858 122 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 NDUFA4P2-201ENST00000489989 244 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 RNU2-13P-201ENST00000515909 113 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 MIR548AO-201ENST00000579992 96 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 AP003357.1-201ENST00000604497 148 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 MIR924-201ENST00000638017 53 ntBASIC0.28□□□□□ -2.36
ECHDC3Q96DC8 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 RNU6-268P-201ENST00000364174 107 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 Y_RNA.329-201ENST00000365209 107 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 Y_RNA.376-201ENST00000365638 108 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 U8.17-201ENST00000391292 132 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 AL589823.1-201ENST00000429577 183 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 MTCO3P10-201ENST00000455912 772 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 HMGN1P10-201ENST00000474557 553 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 Y_RNA.691-201ENST00000516611 103 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 AC012433.1-201ENST00000588916 398 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 AC015726.2-201ENST00000620112 122 ntBASIC0.27□□□□□ -2.37
ECHDC3Q96DC8 MIR18A-201ENST00000362310 71 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 RNU4-45P-201ENST00000365469 141 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 RNU6-442P-201ENST00000383968 104 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 SNORD116-4-201ENST00000384733 96 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 MIR570-201ENST00000384917 97 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 MTND1P2-201ENST00000430604 821 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 snoU13.21-201ENST00000459368 105 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 AC069439.1-201ENST00000494739 167 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 RNU6-911P-201ENST00000516523 104 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 RNU7-4P-201ENST00000516961 62 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 MIR4423-201ENST00000580922 80 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 POLR3GP1-201ENST00000594073 261 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 AC138305.3-201ENST00000624988 240 ntBASIC0.26□□□□□ -2.37
ECHDC3Q96DC8 RNU6-716P-201ENST00000365621 103 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 Y_RNA.456-201ENST00000384232 111 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 Y_RNA.570-201ENST00000384750 101 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 RNU6-855P-201ENST00000410395 104 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 Y_RNA.599-201ENST00000410489 109 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 Y_RNA.646-201ENST00000410980 101 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 AF228730.4-201ENST00000421457 183 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 AC091951.2-201ENST00000500762 203 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 PRDX4P1-201ENST00000507189 574 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 RNU6-718P-201ENST00000516166 105 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 RNU6-358P-201ENST00000516564 75 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 RNU7-30P-201ENST00000516835 62 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 AC144568.1-201ENST00000520139 137 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 MIR4659A-201ENST00000580269 81 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 AC008507.4-201ENST00000585464 127 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 MTND1P7-201ENST00000632801 297 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 TPTEP1-208ENST00000636884 213 ntBASIC0.25□□□□□ -2.37
ECHDC3Q96DC8 RNU6-1209P-201ENST00000363655 107 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 RNU6-767P-201ENST00000384132 107 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 SNORA51.10-201ENST00000384418 136 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 RNU6-1215P-201ENST00000384441 102 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 RNU2-70P-201ENST00000410718 179 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 MTATP6P26-201ENST00000445926 662 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 RN7SKP295-201ENST00000517264 153 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 AC024405.2-202ENST00000532731 184 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 AC127455.1-201ENST00000565496 145 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 MIR5188-201ENST00000583467 113 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 MIR4791-201ENST00000607666 84 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 AC006441.5-201ENST00000612680 209 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 MIR8087-201ENST00000612745 78 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 AC011476.5-201ENST00000615594 130 ntBASIC0.24□□□□□ -2.37
ECHDC3Q96DC8 RNU6-1188P-201ENST00000363795 107 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms