Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNU6-360P-201ENST00000390944 104 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 MIR1298-201ENST00000408783 112 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 FTH1P12-201ENST00000432137 551 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 HMGN1P7-201ENST00000491722 313 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 AC100767.1-201ENST00000528178 123 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 MIR5688-201ENST00000580619 83 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 AC009779.6-201ENST00000603972 165 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 AC090425.1-201ENST00000610007 140 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.01□□□□□ -2.09
TRIM43Q96BQ3 Y_RNA.83-201ENST00000363005 113 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 Y_RNA.253-201ENST00000364562 112 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
TRIM43Q96BQ3 RNU6-383P-201ENST00000410864 94 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 Y_RNA.626-201ENST00000411288 95 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2□□□□□ -2.09
TRIM43Q96BQ3 AC023449.1-201ENST00000454464 154 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 snoU13.18-201ENST00000459483 104 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 Y_RNA.714-201ENST00000517065 90 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 MIR4713-201ENST00000582691 75 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 AC011921.3-201ENST00000605540 361 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2□□□□□ -2.09
TRIM43Q96BQ3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRIM43Q96BQ3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 MIR126-201ENST00000362291 85 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 SNORD68-201ENST00000363214 84 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 RNU6-414P-201ENST00000363705 104 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 RNU4-10P-201ENST00000364383 140 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 AC107393.1-201ENST00000512403 346 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 AC022254.1-201ENST00000567857 235 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 AL591926.4-201ENST00000616895 298 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM43Q96BQ3 AC068700.1-201ENST00000565862 3754 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 RNU4-17P-201ENST00000365598 141 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 RNU6-969P-201ENST00000383900 105 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 MIR626-201ENST00000385032 94 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 MIR1276-201ENST00000408707 83 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 MLLT10P1-201ENST00000418346 262 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 SNRPGP10-201ENST00000432323 225 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 RPL23AP91-201ENST00000569211 455 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 MIR4255-201ENST00000579351 72 ntBASIC1.98□□□□□ -2.09
TRIM43Q96BQ3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 RNU6-653P-201ENST00000363074 106 ntBASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 RNU6-1209P-201ENST00000363655 107 ntBASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 RNU6-1318P-201ENST00000365389 103 ntBASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 RNA5SP496-201ENST00000391240 109 ntBASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 MIR1278-201ENST00000408753 81 ntBASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 RNU6-1007P-201ENST00000516586 107 ntBASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 AC130289.1-201ENST00000577321 73 ntBASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 SNORA4-201ENST00000584302 138 ntBASIC1.97□□□□□ -2.09
TRIM43Q96BQ3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
TRIM43Q96BQ3 Y_RNA.308-201ENST00000365043 101 ntBASIC1.96□□□□□ -2.1
TRIM43Q96BQ3 RNU6-131P-201ENST00000391144 107 ntBASIC1.96□□□□□ -2.1
TRIM43Q96BQ3 OR9P1P-201ENST00000496431 281 ntBASIC1.96□□□□□ -2.1
TRIM43Q96BQ3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.96□□□□□ -2.1
TRIM43Q96BQ3 AL512598.1-201ENST00000610158 273 ntBASIC1.96□□□□□ -2.1
TRIM43Q96BQ3 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
TRIM43Q96BQ3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TRIM43Q96BQ3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TRIM43Q96BQ3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRIM43Q96BQ3 MIR411-201ENST00000362239 96 ntBASIC1.95□□□□□ -2.1
TRIM43Q96BQ3 RNU6-923P-201ENST00000364753 107 ntBASIC1.95□□□□□ -2.1
TRIM43Q96BQ3 RNU6-493P-201ENST00000391321 108 ntBASIC1.95□□□□□ -2.1
TRIM43Q96BQ3 RPL30P13-201ENST00000418873 348 ntBASIC1.95□□□□□ -2.1
TRIM43Q96BQ3 Z98949.2-201ENST00000440996 144 ntBASIC1.95□□□□□ -2.1
TRIM43Q96BQ3 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
TRIM43Q96BQ3 MIR502-201ENST00000606349 86 ntBASIC1.95□□□□□ -2.1
TRIM43Q96BQ3 AC021506.2-201ENST00000612354 169 ntBASIC1.95□□□□□ -2.1
TRIM43Q96BQ3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
TRIM43Q96BQ3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 U8.5-201ENST00000364528 136 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 RNU6-200P-201ENST00000364743 107 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 Y_RNA.297-201ENST00000364950 91 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 RNU6-439P-201ENST00000384188 106 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 MIR522-201ENST00000385071 87 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 RN7SKP101-201ENST00000411376 320 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 AL021397.1-201ENST00000451806 248 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 RN7SKP164-201ENST00000516138 266 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms