Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPS27P16-201ENST00000425758 201 ntBASIC1.37□□□□□ -2.19
RFT1Q96AA3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.37□□□□□ -2.19
RFT1Q96AA3 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
RFT1Q96AA3 AC117454.1-201ENST00000491120 168 ntBASIC1.37□□□□□ -2.19
RFT1Q96AA3 AC100767.1-201ENST00000528178 123 ntBASIC1.37□□□□□ -2.19
RFT1Q96AA3 AC015720.1-201ENST00000565251 277 ntBASIC1.37□□□□□ -2.19
RFT1Q96AA3 MIR3945-201ENST00000581853 98 ntBASIC1.37□□□□□ -2.19
RFT1Q96AA3 MIR502-201ENST00000606349 86 ntBASIC1.37□□□□□ -2.19
RFT1Q96AA3 AC013791.1-201ENST00000616619 62 ntBASIC1.37□□□□□ -2.19
RFT1Q96AA3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.37□□□□□ -2.19
RFT1Q96AA3 MIR6079-201ENST00000635807 62 ntBASIC1.37□□□□□ -2.19
RFT1Q96AA3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RFT1Q96AA3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
RFT1Q96AA3 Y_RNA.29-201ENST00000362570 113 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 MIR513A1-201ENST00000385138 129 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 U8.13-201ENST00000390842 128 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 MIR1278-201ENST00000408753 81 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 RN7SL429P-201ENST00000479090 223 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 RN7SL489P-201ENST00000486185 223 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 RN7SL327P-201ENST00000488659 223 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.36□□□□□ -2.19
RFT1Q96AA3 SCARNA8-201ENST00000515924 131 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 RNU6-1219P-201ENST00000516143 112 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 RNU6-861P-201ENST00000516745 106 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RFT1Q96AA3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.36□□□□□ -2.19
RFT1Q96AA3 AP001485.1-201ENST00000604799 199 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 AL078604.3-201ENST00000615580 211 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 RN7SL853P-201ENST00000617250 223 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.36□□□□□ -2.19
RFT1Q96AA3 AC068647.2-201ENST00000637380 353 ntBASIC1.36□□□□□ -2.19
RFT1Q96AA3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.36□□□□□ -2.19
RFT1Q96AA3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
RFT1Q96AA3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RFT1Q96AA3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
RFT1Q96AA3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RFT1Q96AA3 RNU6-209P-201ENST00000384118 107 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 AL034345.1-201ENST00000407768 123 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 RNU6-383P-201ENST00000410864 94 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 Y_RNA.793-201ENST00000411222 111 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 COX6CP14-201ENST00000469580 174 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 SNORA25.15-201ENST00000516487 89 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 RNU6-453P-201ENST00000516819 85 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.35□□□□□ -2.19
RFT1Q96AA3 MIR5692C2-201ENST00000577959 77 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 AC091178.2-201ENST00000584401 117 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 AL513423.1-201ENST00000621695 132 ntBASIC1.35□□□□□ -2.19
RFT1Q96AA3 RNU1-42P-201ENST00000364033 160 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 RNU6-886P-201ENST00000384319 105 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 MIR562-201ENST00000384894 95 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 RNU6-381P-201ENST00000391259 108 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.34□□□□□ -2.19
RFT1Q96AA3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.34□□□□□ -2.19
RFT1Q96AA3 PGBD4P5-201ENST00000445958 426 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 RPS4XP11-201ENST00000446897 772 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 RNU7-120P-201ENST00000459334 63 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.34□□□□□ -2.19
RFT1Q96AA3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 RNU7-115P-201ENST00000516433 55 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 RNU6-295P-201ENST00000516901 104 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 RNU6-341P-201ENST00000516973 96 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 AC019176.1-201ENST00000518519 225 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 AP002392.1-201ENST00000537692 208 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 AC098479.1-201ENST00000609225 154 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 AL121890.5-201ENST00000620848 304 ntBASIC1.34□□□□□ -2.19
RFT1Q96AA3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
RFT1Q96AA3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 RNU6-1020P-201ENST00000363684 107 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 Y_RNA.262-201ENST00000364641 102 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 RNU6-710P-201ENST00000410424 105 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 RNU5E-9P-201ENST00000411164 104 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 RPL30P13-201ENST00000418873 348 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.33□□□□□ -2.2
RFT1Q96AA3 SUMO1P3-201ENST00000439961 304 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 HSPE1P13-201ENST00000451143 297 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 AL138752.1-201ENST00000452964 351 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 AC091021.1-201ENST00000468051 388 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.33□□□□□ -2.2
RFT1Q96AA3 SNORA70.12-201ENST00000516084 153 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 Y_RNA.700-201ENST00000516806 100 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 RNU6-255P-201ENST00000516957 105 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 MIR4255-201ENST00000579351 72 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 MIR3937-201ENST00000580135 106 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 AP003357.1-201ENST00000604497 148 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 RNU2-4P-201ENST00000606190 192 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 BX248123.2-201ENST00000606318 124 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 MIR548AY-201ENST00000617669 107 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.33□□□□□ -2.2
RFT1Q96AA3 RNU6-899P-201ENST00000363947 107 ntBASIC1.32□□□□□ -2.2
RFT1Q96AA3 Y_RNA.233-201ENST00000364407 101 ntBASIC1.32□□□□□ -2.2
RFT1Q96AA3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.32□□□□□ -2.2
RFT1Q96AA3 RNU6-969P-201ENST00000383900 105 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms