Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RNU7-115P-201ENST00000516433 55 ntBASIC2.02□□□□□ -2.09
ATP2A3Q93084 MIR5094-201ENST00000578766 85 ntBASIC2.02□□□□□ -2.09
ATP2A3Q93084 MIR548AY-201ENST00000617669 107 ntBASIC2.02□□□□□ -2.09
ATP2A3Q93084 AC022513.1-201ENST00000624512 117 ntBASIC2.02□□□□□ -2.09
ATP2A3Q93084 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
ATP2A3Q93084 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ATP2A3Q93084 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
ATP2A3Q93084 RNU4-84P-201ENST00000364200 139 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 Y_RNA.229-201ENST00000364347 113 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 RNU6-275P-201ENST00000364910 107 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 SNORA40.18-201ENST00000391200 128 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 MIR1278-201ENST00000408753 81 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 RNA5SP511-201ENST00000410487 115 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 RNA5SP489-201ENST00000410986 109 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.01□□□□□ -2.09
ATP2A3Q93084 RNA5SP272-201ENST00000516095 111 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 RNU6-1007P-201ENST00000516586 107 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.01□□□□□ -2.09
ATP2A3Q93084 AC022254.1-201ENST00000567857 235 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 AC073413.2-201ENST00000604332 360 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 Y_RNA.802-201ENST00000614892 130 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 MIR3658-201ENST00000636291 56 ntBASIC2.01□□□□□ -2.09
ATP2A3Q93084 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ATP2A3Q93084 Y_RNA.23-201ENST00000362496 106 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 Y_RNA.121-201ENST00000363309 113 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 RNU6-1205P-201ENST00000363625 106 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 SNORA33-201ENST00000363664 130 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 RNU6-1019P-201ENST00000364424 107 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2□□□□□ -2.09
ATP2A3Q93084 RNU6-136P-201ENST00000384663 107 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 SNORA8.3-201ENST00000384679 139 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 RNU6-578P-201ENST00000390980 103 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 RNA5SP100-201ENST00000410903 110 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 RNA5SP59-201ENST00000410922 110 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 5S_rRNA.3-201ENST00000517021 110 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 AC015720.1-201ENST00000565251 277 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 AC127455.1-201ENST00000565496 145 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2□□□□□ -2.09
ATP2A3Q93084 AP003357.1-201ENST00000604497 148 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 AC005972.2-201ENST00000604690 348 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2□□□□□ -2.09
ATP2A3Q93084 5S_rRNA.19-201ENST00000612131 110 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 5S_rRNA.18-201ENST00000621941 110 ntBASIC2□□□□□ -2.09
ATP2A3Q93084 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ATP2A3Q93084 Y_RNA.226-201ENST00000364337 114 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 MIR526A2-201ENST00000390198 65 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 RNU6-131P-201ENST00000391144 107 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 SNORA36B-201ENST00000410438 131 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 CYCSP49-201ENST00000420810 319 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 AL162725.1-201ENST00000435405 301 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 AC069257.2-201ENST00000441819 155 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.99□□□□□ -2.09
ATP2A3Q93084 RNU7-94P-201ENST00000459576 63 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 RN7SL274P-201ENST00000492268 272 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 AL163195.1-201ENST00000496941 348 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 Y_RNA.797-201ENST00000515977 94 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 RN7SKP164-201ENST00000516138 266 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 SNORD116-25-201ENST00000516517 92 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 RNU7-128P-201ENST00000517247 62 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 AC109810.1-201ENST00000534066 224 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.99□□□□□ -2.09
ATP2A3Q93084 MIR4744-201ENST00000581563 82 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 U6.108-201ENST00000637764 58 ntBASIC1.99□□□□□ -2.09
ATP2A3Q93084 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
ATP2A3Q93084 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ATP2A3Q93084 RNY1P11-201ENST00000363759 113 ntBASIC1.98□□□□□ -2.09
ATP2A3Q93084 RNU6-704P-201ENST00000364162 103 ntBASIC1.98□□□□□ -2.09
ATP2A3Q93084 RNU6-312P-201ENST00000364629 107 ntBASIC1.98□□□□□ -2.09
ATP2A3Q93084 MIR520G-201ENST00000385064 90 ntBASIC1.98□□□□□ -2.09
ATP2A3Q93084 Y_RNA.580-201ENST00000391004 95 ntBASIC1.98□□□□□ -2.09
ATP2A3Q93084 RPS26P45-201ENST00000471748 340 ntBASIC1.98□□□□□ -2.09
ATP2A3Q93084 RNU7-116P-201ENST00000516940 62 ntBASIC1.98□□□□□ -2.09
ATP2A3Q93084 RNU6-789P-201ENST00000517105 102 ntBASIC1.98□□□□□ -2.09
ATP2A3Q93084 AL929325.1-201ENST00000603096 117 ntBASIC1.98□□□□□ -2.09
ATP2A3Q93084 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
ATP2A3Q93084 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
ATP2A3Q93084 AC018630.2-201ENST00000534866 2403 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 SNORD113-1-201ENST00000365321 69 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 RNU6-1323P-201ENST00000384025 107 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 MIR562-201ENST00000384894 95 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 MIR616-201ENST00000385293 97 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
ATP2A3Q93084 MIR1287-201ENST00000408492 90 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.97□□□□□ -2.09
ATP2A3Q93084 RPL23AP63-201ENST00000498752 471 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 RNU6-1053P-201ENST00000515930 101 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 AC084364.2-201ENST00000546924 395 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 SUB1P4-201ENST00000566062 339 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 POLR3GP1-201ENST00000594073 261 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 AC103810.8-201ENST00000607347 118 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.97□□□□□ -2.09
ATP2A3Q93084 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
ATP2A3Q93084 RNU1-17P-201ENST00000363022 152 ntBASIC1.96□□□□□ -2.1
ATP2A3Q93084 AL606845.1-201ENST00000404881 255 ntBASIC1.96□□□□□ -2.1
ATP2A3Q93084 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
ATP2A3Q93084 RPS4XP11-201ENST00000446897 772 ntBASIC1.96□□□□□ -2.1
ATP2A3Q93084 SNORA31.17-201ENST00000516953 127 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms