Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 uc_338.36-201ENST00000622331 158 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 RNU6-336P-201ENST00000364891 107 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 RNU6-282P-201ENST00000365357 103 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 MIR516B2-201ENST00000385190 85 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 RNU6-911P-201ENST00000516523 104 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 AL357078.3-201ENST00000607528 618 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 AL157392.4-201ENST00000609756 345 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 SNORD115-32-201ENST00000364079 82 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 RNU6-475P-201ENST00000516073 104 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 RNU6-469P-201ENST00000516253 101 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 RNU6-830P-201ENST00000516353 107 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 SNORD92-201ENST00000585078 85 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 MIR3666-201ENST00000607845 111 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 AC006441.5-201ENST00000612680 209 ntBASIC-0.05□□□□□ -2.42
SYNE1Q8NF91 RNU6-929P-201ENST00000384429 107 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR487A-201ENST00000385009 80 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR196A2-201ENST00000385189 110 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR1285-2-201ENST00000408311 88 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNU6-584P-201ENST00000410350 95 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNU2-11P-201ENST00000459191 187 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 AC012433.1-201ENST00000588916 398 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 AC004223.4-201ENST00000612426 332 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR6755-201ENST00000619993 66 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORD38B-202ENST00000625943 69 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORA20B-201ENST00000384220 132 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR452-201ENST00000385020 85 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MT-TN-201ENST00000387400 73 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNU6-205P-201ENST00000390858 107 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORD28B-201ENST00000390993 75 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORA75.1-201ENST00000391130 148 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORD75.1-201ENST00000408373 60 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 AL365203.2-201ENST00000423444 196 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MTND2P39-201ENST00000457230 764 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MTND1P35-201ENST00000526739 508 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNU6-550P-201ENST00000391057 101 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 snoU13.6-201ENST00000458785 104 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNA5SP461-201ENST00000516451 104 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR3192-201ENST00000584920 77 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 AC005972.2-201ENST00000604690 348 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 AC022960.3-201ENST00000619794 441 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORD113-7-201ENST00000363762 77 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORA27-201ENST00000384323 126 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNA5SP475-201ENST00000410568 110 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNA5SP268-201ENST00000516828 124 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNA5SP47-201ENST00000517230 109 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNU7-181P-201ENST00000517234 74 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR3115-201ENST00000577915 68 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 AL158050.2-201ENST00000605336 568 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 uc_338.4-201ENST00000616635 176 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNA5SP275-201ENST00000363936 118 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORD38C-201ENST00000384381 69 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNU6-535P-201ENST00000384722 107 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNU6-679P-201ENST00000391003 106 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MCFD2P1-201ENST00000417812 300 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR4324-201ENST00000584846 72 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR5706-201ENST00000579841 80 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR4431-201ENST00000579990 94 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 AL050303.3-201ENST00000613704 284 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MIR802-201ENST00000390235 94 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORD77.3-201ENST00000391113 65 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORD115-47-201ENST00000391226 86 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 MTND1P27-201ENST00000451117 902 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SNORD65B-201ENST00000459126 73 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 SCOCP1-201ENST00000554676 349 ntBASIC-0.06□□□□□ -2.42
SYNE1Q8NF91 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-38P-201ENST00000384085 107 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-281P-201ENST00000384212 103 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-790P-201ENST00000384479 105 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AL031667.1-201ENST00000440222 725 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 MRPS36P3-201ENST00000519284 130 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 MIR6863-201ENST00000636112 90 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 FCF1P9-201ENST00000412546 282 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNY4-201ENST00000516507 96 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC121247.2-201ENST00000604776 136 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 SNORD113-6-201ENST00000363345 75 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms