Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC027279.3-201ENST00000625055 122 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.153-201ENST00000363615 91 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.203-201ENST00000364106 102 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 U8.5-201ENST00000364528 136 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-1227P-201ENST00000383981 107 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-639P-201ENST00000384074 107 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA25-201ENST00000384384 134 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 MIR653-201ENST00000385279 96 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.581-201ENST00000391017 97 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA26.5-201ENST00000391215 123 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 MTCO2P33-201ENST00000402100 465 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA36B-201ENST00000410438 131 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 AP1B1P2-201ENST00000416196 106 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 BTF3P4-201ENST00000418852 495 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 U8.19-201ENST00000459095 133 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 RNU7-141P-201ENST00000459304 62 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.714-201ENST00000517065 90 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 RNA5SP404-201ENST00000517118 132 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 AC127455.1-201ENST00000565496 145 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 MIR4762-201ENST00000585261 75 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 AL359821.1-201ENST00000605519 182 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 BX284668.6-201ENST00000606899 438 ntBASIC0.92□□□□□ -2.26
CCDC71LQ8N9Z2 snoU2_19.2-201ENST00000363024 80 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 SNORD50B-201ENST00000364995 70 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-290P-201ENST00000365212 101 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA72.4-201ENST00000384174 132 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 MIR516B2-201ENST00000385190 85 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-910P-201ENST00000390844 107 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA17.3-201ENST00000391159 129 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 MIR1278-201ENST00000408753 81 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 MIR1298-201ENST00000408783 112 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-985P-201ENST00000410182 104 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 MTCO1P5-201ENST00000433573 344 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 UBL5P1-201ENST00000507979 193 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA70.22-201ENST00000517160 124 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 MIR4421-201ENST00000578133 69 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 AL512605.2-201ENST00000592972 256 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 JPX_2.1-201ENST00000614161 69 ntBASIC0.91□□□□□ -2.26
CCDC71LQ8N9Z2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.4-201ENST00000362333 112 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.136-201ENST00000363444 102 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-1209P-201ENST00000363655 107 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 snoU2-30.1-201ENST00000365012 70 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.541-201ENST00000384640 113 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 MIR452-201ENST00000385020 85 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 RNU4-62P-201ENST00000410125 130 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-437P-201ENST00000459408 95 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 RNU2-31P-201ENST00000516954 155 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 AP003733.2-201ENST00000529409 171 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 AP003072.1-201ENST00000531740 145 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 AC037487.3-201ENST00000606668 112 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC71LQ8N9Z2 SNORA25.1-201ENST00000362326 128 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.16-201ENST00000362421 102 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-514P-201ENST00000384208 107 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-763P-201ENST00000390865 106 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 SNORA53-201ENST00000391141 249 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-321P-201ENST00000410912 106 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 AC113618.1-201ENST00000416747 285 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 RPL39P39-201ENST00000455840 151 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 MTND5P22-201ENST00000458380 195 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 RNU7-95P-201ENST00000459222 64 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 TRMT112P2-201ENST00000512910 132 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 MIR4303-201ENST00000581299 66 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 AC005357.1-201ENST00000588399 301 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 AL357312.1-201ENST00000603879 298 ntBASIC0.89□□□□□ -2.27
CCDC71LQ8N9Z2 AL391987.6-201ENST00000305671 199 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.796-201ENST00000364268 102 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.276-201ENST00000364732 109 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.799-201ENST00000364992 102 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.336-201ENST00000365307 109 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-662P-201ENST00000384253 104 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 MIR136-201ENST00000385207 82 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 MIR802-201ENST00000390235 94 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-1143P-201ENST00000516125 104 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 SCARNA24.2-201ENST00000516968 130 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-570P-201ENST00000517051 105 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 RPL23AP91-201ENST00000569211 455 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 AC022140.2-201ENST00000623500 188 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 AC027335.2-201ENST00000624030 375 ntBASIC0.88□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-1205P-201ENST00000363625 106 ntBASIC0.87□□□□□ -2.27
CCDC71LQ8N9Z2 SNORA7.1-201ENST00000363750 139 ntBASIC0.87□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-899P-201ENST00000363947 107 ntBASIC0.87□□□□□ -2.27
CCDC71LQ8N9Z2 SNORD14E-201ENST00000364009 85 ntBASIC0.87□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-326P-201ENST00000365480 107 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 393.1 ms