Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.53□□□□□ -2.16
BEST3Q8N1M1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.53□□□□□ -2.16
BEST3Q8N1M1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.53□□□□□ -2.16
BEST3Q8N1M1 SNORD3E-202ENST00000627253 216 ntBASIC1.53□□□□□ -2.16
BEST3Q8N1M1 MIRLET7C-201ENST00000362160 84 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.20-201ENST00000362479 113 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 RNA5SP363-201ENST00000365072 115 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 RNU6-969P-201ENST00000383900 105 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 MIR522-201ENST00000385071 87 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 MIR660-201ENST00000385235 97 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 SNORA67.5-201ENST00000391036 107 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 U8.16-201ENST00000391279 133 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 MLLT10P1-201ENST00000418346 262 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.52□□□□□ -2.17
BEST3Q8N1M1 MIR4724-201ENST00000579485 89 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 AC027279.3-201ENST00000625055 122 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 ICE2P2-201ENST00000483823 2787 ntBASIC1.52□□□□□ -2.17
BEST3Q8N1M1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
BEST3Q8N1M1 MIR378A-201ENST00000362177 66 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 MIR367-201ENST00000362299 68 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 RNU6-1209P-201ENST00000363655 107 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.401-201ENST00000383965 117 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 MIR513A1-201ENST00000385138 129 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 MIR526A2-201ENST00000390198 65 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 RNU6-131P-201ENST00000391144 107 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.618-201ENST00000410949 107 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 RNU6-651P-201ENST00000411040 105 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.51□□□□□ -2.17
BEST3Q8N1M1 AC005908.1-201ENST00000468701 347 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 CYCTP-201ENST00000504253 315 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 RNU7-12P-201ENST00000516030 62 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 RNU6-1023P-201ENST00000516137 106 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.673-201ENST00000516306 88 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 RNU6-1007P-201ENST00000516586 107 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.51□□□□□ -2.17
BEST3Q8N1M1 CBX3P4-201ENST00000538909 354 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 MIR4643-201ENST00000577473 78 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 AC015688.6-201ENST00000577737 104 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 MIR3128-201ENST00000581957 66 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 AC120024.3-201ENST00000603167 156 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.802-201ENST00000614892 130 ntBASIC1.51□□□□□ -2.17
BEST3Q8N1M1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
BEST3Q8N1M1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 SNORD27-201ENST00000363981 72 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.307-201ENST00000365022 117 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.447-201ENST00000384184 113 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.477-201ENST00000384352 108 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 RNU6-163P-201ENST00000384396 106 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 SNORA8.3-201ENST00000384679 139 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 RNA5SP496-201ENST00000391240 109 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 MIR934-201ENST00000401241 83 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 RNU4-62P-201ENST00000410125 130 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.5□□□□□ -2.17
BEST3Q8N1M1 HSPE1P24-201ENST00000450782 238 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 MTND1P19-201ENST00000511780 315 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.5□□□□□ -2.17
BEST3Q8N1M1 RPL23AP91-201ENST00000569211 455 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 AC087685.1-201ENST00000587507 141 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 AC006006.1-201ENST00000603082 144 ntBASIC1.5□□□□□ -2.17
BEST3Q8N1M1 AC068700.1-201ENST00000565862 3754 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 SNORD33-201ENST00000362761 85 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 RNU6-833P-201ENST00000363486 107 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 SNORA20.1-201ENST00000364790 130 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 SNORD58.1-201ENST00000391313 66 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 MIR891A-201ENST00000401237 79 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 RNU6-383P-201ENST00000410864 94 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 BTF3P4-201ENST00000418852 495 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 AC023449.1-201ENST00000454464 154 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 AC108729.3-201ENST00000513484 108 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 SUMO2P16-201ENST00000519475 264 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 SNORD53B-201ENST00000577887 78 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.49□□□□□ -2.17
BEST3Q8N1M1 AL442067.1-201ENST00000613261 223 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 MIR8063-201ENST00000621930 81 ntBASIC1.49□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.304-201ENST00000365011 112 ntBASIC1.48□□□□□ -2.17
BEST3Q8N1M1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.48□□□□□ -2.17
BEST3Q8N1M1 RNA5SP259-201ENST00000365541 109 ntBASIC1.48□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.539-201ENST00000384635 107 ntBASIC1.48□□□□□ -2.17
BEST3Q8N1M1 MIR1278-201ENST00000408753 81 ntBASIC1.48□□□□□ -2.17
BEST3Q8N1M1 RN7SKP101-201ENST00000411376 320 ntBASIC1.48□□□□□ -2.17
BEST3Q8N1M1 AC114811.1-201ENST00000507207 168 ntBASIC1.48□□□□□ -2.17
BEST3Q8N1M1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.48□□□□□ -2.17
BEST3Q8N1M1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.48□□□□□ -2.17
BEST3Q8N1M1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
BEST3Q8N1M1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
BEST3Q8N1M1 MIR302D-201ENST00000362275 68 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.65-201ENST00000362846 100 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.76-201ENST00000362931 109 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.242-201ENST00000364473 110 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.292-201ENST00000364904 97 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 SNORD1A-201ENST00000364968 72 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 RNU6-338P-201ENST00000383888 105 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.489-201ENST00000384410 101 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 MIR626-201ENST00000385032 94 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 RNU1-78P-201ENST00000391248 165 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 PIGPP3-201ENST00000425307 415 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms