Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-2.72□□□□□ -2.84
DDX60Q8IY21 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-2.72□□□□□ -2.84
DDX60Q8IY21 MRPS10P1-201ENST00000448483 130 ntBASIC-2.72□□□□□ -2.84
DDX60Q8IY21 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-2.72□□□□□ -2.84
DDX60Q8IY21 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-2.72□□□□□ -2.84
DDX60Q8IY21 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-2.72□□□□□ -2.84
DDX60Q8IY21 RNU1-141P-201ENST00000364623 158 ntBASIC-2.73□□□□□ -2.85
DDX60Q8IY21 Y_RNA.368-201ENST00000365547 113 ntBASIC-2.73□□□□□ -2.85
DDX60Q8IY21 MTND3P13-201ENST00000574391 343 ntBASIC-2.73□□□□□ -2.85
DDX60Q8IY21 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-2.73□□□□□ -2.85
DDX60Q8IY21 PART1_1.1-201ENST00000611761 217 ntBASIC-2.73□□□□□ -2.85
DDX60Q8IY21 RNU6-371P-201ENST00000364283 108 ntBASIC-2.73□□□□□ -2.85
DDX60Q8IY21 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.73□□□□□ -2.85
DDX60Q8IY21 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-2.73□□□□□ -2.85
DDX60Q8IY21 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-2.73□□□□□ -2.85
DDX60Q8IY21 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-2.73□□□□□ -2.85
DDX60Q8IY21 RNU6-553P-201ENST00000364047 96 ntBASIC-2.74□□□□□ -2.85
DDX60Q8IY21 Y_RNA.220-201ENST00000364244 109 ntBASIC-2.74□□□□□ -2.85
DDX60Q8IY21 RNU6-154P-201ENST00000384306 106 ntBASIC-2.74□□□□□ -2.85
DDX60Q8IY21 Y_RNA.588-201ENST00000391254 102 ntBASIC-2.74□□□□□ -2.85
DDX60Q8IY21 MIR3139-201ENST00000579145 76 ntBASIC-2.74□□□□□ -2.85
DDX60Q8IY21 AC120349.2-201ENST00000625002 298 ntBASIC-2.74□□□□□ -2.85
DDX60Q8IY21 RNU4-92P-201ENST00000363783 136 ntBASIC-2.75□□□□□ -2.85
DDX60Q8IY21 RNU6-946P-201ENST00000383878 107 ntBASIC-2.75□□□□□ -2.85
DDX60Q8IY21 MIR507-201ENST00000385234 94 ntBASIC-2.75□□□□□ -2.85
DDX60Q8IY21 RNU7-104P-201ENST00000459398 79 ntBASIC-2.75□□□□□ -2.85
DDX60Q8IY21 AC090617.9-201ENST00000623751 147 ntBASIC-2.75□□□□□ -2.85
DDX60Q8IY21 RNA5SP403-201ENST00000363598 108 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 RNU6-164P-201ENST00000364604 103 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 SNORA1.2-201ENST00000365189 134 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 RNU6-1005P-201ENST00000384519 107 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 USP9YP30-201ENST00000430729 455 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 AC244090.1-201ENST00000441884 93 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 U8.19-201ENST00000459095 133 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-2.76□□□□□ -2.85
DDX60Q8IY21 AC108019.1-201ENST00000512540 175 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-2.76□□□□□ -2.85
DDX60Q8IY21 YWHAEP2-201ENST00000580066 112 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 AP001836.1-201ENST00000604675 523 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 MIR664B-201ENST00000626756 61 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 Y_RNA.229-201ENST00000364347 113 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 SNORD2-201ENST00000459163 69 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 SNORD115-40-201ENST00000606510 82 ntBASIC-2.76□□□□□ -2.85
DDX60Q8IY21 SNORD115-25-201ENST00000362619 82 ntBASIC-2.77□□□□□ -2.85
DDX60Q8IY21 RNU6-324P-201ENST00000363957 106 ntBASIC-2.77□□□□□ -2.85
DDX60Q8IY21 RNU6-744P-201ENST00000365557 107 ntBASIC-2.77□□□□□ -2.85
DDX60Q8IY21 RNU6-1316P-201ENST00000384242 108 ntBASIC-2.77□□□□□ -2.85
DDX60Q8IY21 Y_RNA.598-201ENST00000410480 95 ntBASIC-2.77□□□□□ -2.85
DDX60Q8IY21 AC114982.2-201ENST00000461396 358 ntBASIC-2.77□□□□□ -2.85
DDX60Q8IY21 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-2.77□□□□□ -2.85
DDX60Q8IY21 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-2.77□□□□□ -2.85
DDX60Q8IY21 MIR548AC-201ENST00000585049 88 ntBASIC-2.77□□□□□ -2.85
DDX60Q8IY21 AC091965.4-201ENST00000607691 587 ntBASIC-2.78□□□□□ -2.85
DDX60Q8IY21 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.78□□□□□ -2.85
DDX60Q8IY21 RNU5E-6P-201ENST00000365574 115 ntBASIC-2.79□□□□□ -2.86
DDX60Q8IY21 RNU6-476P-201ENST00000384726 107 ntBASIC-2.79□□□□□ -2.86
DDX60Q8IY21 RNU2-9P-201ENST00000410194 145 ntBASIC-2.79□□□□□ -2.86
DDX60Q8IY21 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-2.79□□□□□ -2.86
DDX60Q8IY21 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-2.79□□□□□ -2.86
DDX60Q8IY21 AC093783.1-201ENST00000612976 329 ntBASIC-2.79□□□□□ -2.86
DDX60Q8IY21 AC231657.1-201ENST00000624313 397 ntBASIC-2.79□□□□□ -2.86
DDX60Q8IY21 MIR578-201ENST00000384828 96 ntBASIC-2.79□□□□□ -2.86
DDX60Q8IY21 RNU2-51P-201ENST00000410708 197 ntBASIC-2.79□□□□□ -2.86
DDX60Q8IY21 MTND2P20-201ENST00000440805 661 ntBASIC-2.79□□□□□ -2.86
DDX60Q8IY21 RNU7-74P-201ENST00000459104 62 ntBASIC-2.79□□□□□ -2.86
DDX60Q8IY21 MIR4666A-201ENST00000580160 79 ntBASIC-2.79□□□□□ -2.86
DDX60Q8IY21 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.79□□□□□ -2.86
DDX60Q8IY21 SNORA63.5-201ENST00000363548 123 ntBASIC-2.8□□□□□ -2.86
DDX60Q8IY21 RNU2-39P-201ENST00000410604 198 ntBASIC-2.8□□□□□ -2.86
DDX60Q8IY21 RNU6-830P-201ENST00000516353 107 ntBASIC-2.8□□□□□ -2.86
DDX60Q8IY21 RNU2-10P-201ENST00000516375 211 ntBASIC-2.8□□□□□ -2.86
DDX60Q8IY21 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.81□□□□□ -2.86
DDX60Q8IY21 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.81□□□□□ -2.86
DDX60Q8IY21 SNORD50B-201ENST00000364995 70 ntBASIC-2.81□□□□□ -2.86
DDX60Q8IY21 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-2.81□□□□□ -2.86
DDX60Q8IY21 RNU6-484P-201ENST00000384016 107 ntBASIC-2.81□□□□□ -2.86
DDX60Q8IY21 Y_RNA.456-201ENST00000384232 111 ntBASIC-2.81□□□□□ -2.86
DDX60Q8IY21 RNU7-181P-201ENST00000517234 74 ntBASIC-2.81□□□□□ -2.86
DDX60Q8IY21 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-2.81□□□□□ -2.86
DDX60Q8IY21 AC023158.2-201ENST00000614876 543 ntBASIC-2.81□□□□□ -2.86
DDX60Q8IY21 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.81□□□□□ -2.86
DDX60Q8IY21 AC097460.3-201ENST00000623099 442 ntBASIC-2.81□□□□□ -2.86
DDX60Q8IY21 MIR6874-201ENST00000635894 71 ntBASIC-2.81□□□□□ -2.86
DDX60Q8IY21 Y_RNA.450-201ENST00000384198 113 ntBASIC-2.82□□□□□ -2.86
DDX60Q8IY21 AL078595.1-201ENST00000404458 226 ntBASIC-2.82□□□□□ -2.86
DDX60Q8IY21 MIR320B2-201ENST00000408479 138 ntBASIC-2.82□□□□□ -2.86
DDX60Q8IY21 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-2.82□□□□□ -2.86
DDX60Q8IY21 MTCO2P11-201ENST00000431069 680 ntBASIC-2.82□□□□□ -2.86
DDX60Q8IY21 AC236972.2-201ENST00000434979 310 ntBASIC-2.82□□□□□ -2.86
DDX60Q8IY21 RNU6-437P-201ENST00000459408 95 ntBASIC-2.82□□□□□ -2.86
DDX60Q8IY21 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-2.82□□□□□ -2.86
DDX60Q8IY21 AC005776.1-201ENST00000603164 290 ntBASIC-2.82□□□□□ -2.86
DDX60Q8IY21 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-2.82□□□□□ -2.86
DDX60Q8IY21 AC010598.1-201ENST00000510378 103 ntBASIC-2.82□□□□□ -2.86
DDX60Q8IY21 AC008873.1-201ENST00000625051 138 ntBASIC-2.82□□□□□ -2.86
DDX60Q8IY21 Y_RNA.119-201ENST00000363301 96 ntBASIC-2.83□□□□□ -2.86
DDX60Q8IY21 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.83□□□□□ -2.86
DDX60Q8IY21 HMGN2P32-201ENST00000444648 269 ntBASIC-2.83□□□□□ -2.86
DDX60Q8IY21 MTCO2P6-201ENST00000463134 685 ntBASIC-2.83□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms