Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 HMGN2P7-201ENST00000456186 273 ntBASIC3.39□□□□□ -1.87
NPAS3Q8IXF0 RNU7-96P-201ENST00000459535 64 ntBASIC3.39□□□□□ -1.87
NPAS3Q8IXF0 AC114811.1-201ENST00000507207 168 ntBASIC3.39□□□□□ -1.87
NPAS3Q8IXF0 MIR4425-201ENST00000580572 84 ntBASIC3.39□□□□□ -1.87
NPAS3Q8IXF0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
NPAS3Q8IXF0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS3Q8IXF0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.39□□□□□ -1.87
NPAS3Q8IXF0 AL365361.1-201ENST00000566942 3481 ntBASIC3.39□□□□□ -1.87
NPAS3Q8IXF0 AC007336.1-201ENST00000576365 3828 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 SNORA22.1-201ENST00000362701 134 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 SNORD115-2-201ENST00000362842 82 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 SNORD115-20-201ENST00000365099 82 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 RNU11-5P-201ENST00000391216 129 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 SNORD30.1-201ENST00000391309 70 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 RNU6-519P-201ENST00000410590 108 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 SPINT5P-201ENST00000448174 155 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 RNU6-70P-201ENST00000516438 60 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 AC090821.2-201ENST00000523552 176 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 AL033523.1-201ENST00000605153 153 ntBASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.38□□□□□ -1.87
NPAS3Q8IXF0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 SNORD6-201ENST00000365444 73 ntBASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 RNU6-296P-201ENST00000384608 107 ntBASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 MIR184-201ENST00000384962 84 ntBASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 MIR548G-201ENST00000408442 89 ntBASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 RNU6-141P-201ENST00000410499 105 ntBASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 RNU7-2P-201ENST00000516096 62 ntBASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 AL358944.1-201ENST00000528537 144 ntBASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 MIR5047-201ENST00000579212 100 ntBASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.37□□□□□ -1.87
NPAS3Q8IXF0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 MIR181B2-201ENST00000385004 89 ntBASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 MIR607-201ENST00000385241 96 ntBASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 MIR1236-201ENST00000408340 102 ntBASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 AP002004.2-201ENST00000531656 154 ntBASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 MIR3186-201ENST00000577404 85 ntBASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 AC103810.1-201ENST00000579873 453 ntBASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 MIR2682-201ENST00000580305 110 ntBASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.36□□□□□ -1.87
NPAS3Q8IXF0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 SNORA25.6-201ENST00000364121 118 ntBASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 SNORA7.4-201ENST00000384249 137 ntBASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 RNU6-198P-201ENST00000384258 104 ntBASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 RNU6-800P-201ENST00000384473 103 ntBASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 AC008885.1-201ENST00000514930 301 ntBASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 MIR7106-201ENST00000612419 65 ntBASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 uc_338.14-201ENST00000613162 166 ntBASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS3Q8IXF0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 MIRLET7A1-201ENST00000362295 80 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 snoU2-30.2-201ENST00000362805 70 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 RNU6-161P-201ENST00000363051 106 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 RNU6-624P-201ENST00000363411 107 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 Y_RNA.336-201ENST00000365307 109 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 RNU6-380P-201ENST00000410207 107 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 RNU6-634P-201ENST00000459134 106 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 AC078918.1-201ENST00000498515 228 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 RNU6-826P-201ENST00000516827 104 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 RNU6-856P-201ENST00000516959 98 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 AC007536.1-201ENST00000533382 349 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 UBL5P2-201ENST00000583788 219 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 RNU6-90P-201ENST00000606352 106 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 uc_338.1-201ENST00000612113 180 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 MIR664A-201ENST00000626086 82 ntBASIC3.34□□□□□ -1.87
NPAS3Q8IXF0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NPAS3Q8IXF0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS3Q8IXF0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS3Q8IXF0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms