Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FAM106DP-201ENST00000586416 501 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 Y_RNA.84-201ENST00000363011 104 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 SNORD50B-201ENST00000364995 70 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 RNU6-969P-201ENST00000383900 105 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 RNU6-1160P-201ENST00000384546 104 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 RNU6-763P-201ENST00000390865 106 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 RNU6-1109P-201ENST00000391187 107 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 MIR1298-201ENST00000408783 112 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 RNU6-165P-201ENST00000517170 99 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 AC087685.1-201ENST00000587507 141 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 AC005357.1-201ENST00000588399 301 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LDB1Q86U70 snoU13.31-201ENST00000607291 104 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 Y_RNA.812-201ENST00000610788 101 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 Y_RNA.784-201ENST00000613803 101 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 Y_RNA.787-201ENST00000616522 101 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 Y_RNA.780-201ENST00000617336 101 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 Y_RNA.801-201ENST00000619005 101 ntBASIC1.29□□□□□ -2.2
LDB1Q86U70 RNU6-1209P-201ENST00000363655 107 ntBASIC1.28□□□□□ -2.2
LDB1Q86U70 Y_RNA.796-201ENST00000364268 102 ntBASIC1.28□□□□□ -2.2
LDB1Q86U70 Y_RNA.799-201ENST00000364992 102 ntBASIC1.28□□□□□ -2.2
LDB1Q86U70 RNU6-144P-201ENST00000383951 107 ntBASIC1.28□□□□□ -2.2
LDB1Q86U70 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.28□□□□□ -2.2
LDB1Q86U70 AC091959.1-201ENST00000495857 238 ntBASIC1.28□□□□□ -2.2
LDB1Q86U70 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.28□□□□□ -2.2
LDB1Q86U70 SNORA27.4-201ENST00000516650 95 ntBASIC1.28□□□□□ -2.2
LDB1Q86U70 Y_RNA.720-201ENST00000517166 92 ntBASIC1.28□□□□□ -2.2
LDB1Q86U70 AC008269.2-201ENST00000561915 1105 ntBASIC1.28□□□□□ -2.2
LDB1Q86U70 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.28□□□□□ -2.2
LDB1Q86U70 RNU6-1205P-201ENST00000363625 106 ntBASIC1.27□□□□□ -2.21
LDB1Q86U70 SNORA7.1-201ENST00000363750 139 ntBASIC1.27□□□□□ -2.21
LDB1Q86U70 RNU6-694P-201ENST00000364071 147 ntBASIC1.27□□□□□ -2.21
LDB1Q86U70 Y_RNA.336-201ENST00000365307 109 ntBASIC1.27□□□□□ -2.21
LDB1Q86U70 AC108729.3-201ENST00000513484 108 ntBASIC1.27□□□□□ -2.21
LDB1Q86U70 RNU6-1338P-201ENST00000516328 91 ntBASIC1.27□□□□□ -2.21
LDB1Q86U70 RNU6-1007P-201ENST00000516586 107 ntBASIC1.27□□□□□ -2.21
LDB1Q86U70 MIR4498-201ENST00000577599 66 ntBASIC1.27□□□□□ -2.21
LDB1Q86U70 AC013791.1-201ENST00000616619 62 ntBASIC1.27□□□□□ -2.21
LDB1Q86U70 Y_RNA.16-201ENST00000362421 102 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 SNORD14E-201ENST00000364009 85 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 Y_RNA.338-201ENST00000365320 114 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 RNU6-713P-201ENST00000384761 107 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 MIR606-201ENST00000384851 96 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 MIR136-201ENST00000385207 82 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 RNU6-1203P-201ENST00000410703 110 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 RPL39P39-201ENST00000455840 151 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 MTND5P22-201ENST00000458380 195 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 Y_RNA.637-201ENST00000459424 114 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 SERF1AP1-201ENST00000514575 187 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
LDB1Q86U70 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
LDB1Q86U70 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
LDB1Q86U70 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
LDB1Q86U70 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
LDB1Q86U70 RNU6-1272P-201ENST00000362776 107 ntBASIC1.25□□□□□ -2.21
LDB1Q86U70 MIR15B-201ENST00000385045 98 ntBASIC1.25□□□□□ -2.21
LDB1Q86U70 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
LDB1Q86U70 SNORA40.6-201ENST00000391153 128 ntBASIC1.25□□□□□ -2.21
LDB1Q86U70 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
LDB1Q86U70 RNU6-947P-201ENST00000516264 106 ntBASIC1.25□□□□□ -2.21
LDB1Q86U70 RNU6-570P-201ENST00000517051 105 ntBASIC1.25□□□□□ -2.21
LDB1Q86U70 RPL23AP91-201ENST00000569211 455 ntBASIC1.25□□□□□ -2.21
LDB1Q86U70 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.24□□□□□ -2.21
LDB1Q86U70 AL391987.6-201ENST00000305671 199 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 UBE2WP1-201ENST00000362030 340 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 RNU6-662P-201ENST00000384253 104 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 MIR516B2-201ENST00000385190 85 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 MIR1278-201ENST00000408753 81 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 BTF3P11-201ENST00000426582 477 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 NDUFA4P2-201ENST00000489989 244 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.24□□□□□ -2.21
LDB1Q86U70 RNU6-635P-201ENST00000516651 102 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 AC090142.3-201ENST00000519012 385 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.24□□□□□ -2.21
LDB1Q86U70 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.24□□□□□ -2.21
LDB1Q86U70 MIR5692C2-201ENST00000577959 77 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 MIR3660-201ENST00000584845 100 ntBASIC1.24□□□□□ -2.21
LDB1Q86U70 Y_RNA.145-201ENST00000363527 102 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 Y_RNA.217-201ENST00000364214 105 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 Y_RNA.242-201ENST00000364473 110 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 RNU6-442P-201ENST00000383968 104 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 MIR802-201ENST00000390235 94 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 RNU6-1054P-201ENST00000411293 104 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.23□□□□□ -2.21
LDB1Q86U70 Y_RNA.641-201ENST00000459414 105 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 MTATP8P1-201ENST00000467115 207 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 TRBVB-201ENST00000477100 408 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 SCARNA24.2-201ENST00000516968 130 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
LDB1Q86U70 AL157834.3-201ENST00000615543 103 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 AL353770.2-201ENST00000620024 78 ntBASIC1.23□□□□□ -2.21
LDB1Q86U70 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.23□□□□□ -2.21
LDB1Q86U70 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
LDB1Q86U70 SNORA63C-201ENST00000364578 129 ntBASIC1.22□□□□□ -2.21
LDB1Q86U70 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.22□□□□□ -2.21
LDB1Q86U70 SNORD11-201ENST00000459124 84 ntBASIC1.22□□□□□ -2.21
LDB1Q86U70 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
LDB1Q86U70 SNORA31.4-201ENST00000516049 129 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms