Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 RNU6-239P-201ENST00000390990 99 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 RNU4-43P-201ENST00000410628 137 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 RNA5SP100-201ENST00000410903 110 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 RNA5SP59-201ENST00000410922 110 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 RNU2-55P-201ENST00000411146 174 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 FTH1P12-201ENST00000432137 551 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 AC107027.2-201ENST00000512197 115 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 RNA5SP200-201ENST00000516360 103 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 RNU7-28P-201ENST00000516759 62 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 Y_RNA.714-201ENST00000517065 90 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.37□□□□□ -2.03
DDX53Q86TM3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.37□□□□□ -2.03
DDX53Q86TM3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
DDX53Q86TM3 RNA5SP276-201ENST00000362580 94 ntBASIC2.36□□□□□ -2.03
DDX53Q86TM3 MIR548M-201ENST00000408260 86 ntBASIC2.36□□□□□ -2.03
DDX53Q86TM3 SNORA79-201ENST00000408376 140 ntBASIC2.36□□□□□ -2.03
DDX53Q86TM3 RN7SKP200-201ENST00000410564 320 ntBASIC2.36□□□□□ -2.03
DDX53Q86TM3 MRPS17P9-201ENST00000511924 393 ntBASIC2.36□□□□□ -2.03
DDX53Q86TM3 SNORA28-201ENST00000606769 126 ntBASIC2.36□□□□□ -2.03
DDX53Q86TM3 MIR7111-201ENST00000619751 72 ntBASIC2.36□□□□□ -2.03
DDX53Q86TM3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX53Q86TM3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.35□□□□□ -2.03
DDX53Q86TM3 SNORA16B-201ENST00000364674 135 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 SNORA67.3-201ENST00000384366 140 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 RNU6-950P-201ENST00000384651 107 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 SNORD72-201ENST00000390994 80 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.35□□□□□ -2.03
DDX53Q86TM3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.35□□□□□ -2.03
DDX53Q86TM3 AC008507.4-201ENST00000585464 127 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 AC078899.2-201ENST00000595282 212 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 AL353997.5-201ENST00000618886 171 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 MIR6132-201ENST00000622083 109 ntBASIC2.35□□□□□ -2.03
DDX53Q86TM3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.35□□□□□ -2.03
DDX53Q86TM3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX53Q86TM3 ZNF702P-202ENST00000434269 1966 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 U8.5-201ENST00000364528 136 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 RNU6-449P-201ENST00000383914 107 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 Y_RNA.506-201ENST00000384494 102 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 Y_RNA.580-201ENST00000391004 95 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 RNU2-70P-201ENST00000410718 179 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
DDX53Q86TM3 RNA5SP57-201ENST00000459463 123 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 RNU6-197P-201ENST00000516680 100 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 MIR4762-201ENST00000585261 75 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.34□□□□□ -2.03
DDX53Q86TM3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
DDX53Q86TM3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
DDX53Q86TM3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
DDX53Q86TM3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
DDX53Q86TM3 RNU6-1084P-201ENST00000362498 107 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 Y_RNA.91-201ENST00000363042 107 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 SNORD50B-201ENST00000364995 70 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 Y_RNA.486-201ENST00000384398 107 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 AL023284.1-201ENST00000403956 276 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 AL034345.1-201ENST00000407768 123 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 RNU7-34P-201ENST00000459394 64 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 RNU7-200P-201ENST00000516105 62 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 RNU7-121P-201ENST00000516604 62 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 MIR4662B-201ENST00000579498 81 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 MIR3133-201ENST00000583157 78 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 AC087685.1-201ENST00000587507 141 ntBASIC2.33□□□□□ -2.04
DDX53Q86TM3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
DDX53Q86TM3 Y_RNA.164-201ENST00000363709 102 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 Y_RNA.634-201ENST00000364811 113 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 Y_RNA.337-201ENST00000365312 102 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 RNU6-746P-201ENST00000384112 109 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 RNU6-125P-201ENST00000384505 107 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 RPL23AP42-201ENST00000471152 471 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 RNA5SP481-201ENST00000516814 122 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 SNORA31.17-201ENST00000516953 127 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 RNU6-1116P-201ENST00000517269 99 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 MIR4709-201ENST00000577272 72 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
DDX53Q86TM3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
DDX53Q86TM3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDX53Q86TM3 ICE2P2-201ENST00000483823 2787 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 MIR144-201ENST00000384886 86 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 MIR802-201ENST00000390235 94 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 CALM2P4-201ENST00000430810 426 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 snoU13.27-201ENST00000459278 104 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 RNU6-346P-201ENST00000516288 111 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 RNA5SP153-201ENST00000516498 76 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 Y_RNA.703-201ENST00000516846 111 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 AL160236.1-201ENST00000556317 195 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 MIR378D2-201ENST00000580636 98 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 234.4 ms