Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 AC092989.1-201ENST00000481235 277 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.1□□□□□ -2.39
SSX9Q7RTT3 RNU6-830P-201ENST00000516353 107 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 LARP7P1-201ENST00000605576 316 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 PISRT1.1-201ENST00000616930 107 ntBASIC0.1□□□□□ -2.39
SSX9Q7RTT3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.09□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.112-201ENST00000363250 102 ntBASIC0.09□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.554-201ENST00000384672 102 ntBASIC0.09□□□□□ -2.4
SSX9Q7RTT3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.09□□□□□ -2.4
SSX9Q7RTT3 FCF1P4-201ENST00000448326 183 ntBASIC0.09□□□□□ -2.4
SSX9Q7RTT3 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
SSX9Q7RTT3 MIR4676-201ENST00000583078 72 ntBASIC0.09□□□□□ -2.4
SSX9Q7RTT3 JPX_2.1-201ENST00000614161 69 ntBASIC0.09□□□□□ -2.4
SSX9Q7RTT3 RNU6-20P-201ENST00000384106 107 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 RNU6-125P-201ENST00000384505 107 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 MIR548K-201ENST00000408406 116 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 RNU6-855P-201ENST00000410395 104 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 RPL30P15-201ENST00000457129 321 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.08□□□□□ -2.4
SSX9Q7RTT3 RNU7-56P-201ENST00000458744 62 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 RNU6-966P-201ENST00000516479 104 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 MIR4431-201ENST00000579990 94 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 AC060780.3-201ENST00000589464 80 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 POLR3GP1-201ENST00000594073 261 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 AC020891.4-201ENST00000605745 93 ntBASIC0.08□□□□□ -2.4
SSX9Q7RTT3 RNU6-626P-201ENST00000363354 107 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 RNU6-268P-201ENST00000364174 107 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.450-201ENST00000384198 113 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 SNORA69.1-201ENST00000390904 137 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.07□□□□□ -2.4
SSX9Q7RTT3 SNRPGP14-201ENST00000435400 219 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.07□□□□□ -2.4
SSX9Q7RTT3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.07□□□□□ -2.4
SSX9Q7RTT3 RNU6-307P-201ENST00000516743 106 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 MIR4264-201ENST00000583520 66 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 SNORA25.18-201ENST00000607153 114 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 uc_338.4-201ENST00000616635 176 ntBASIC0.07□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.194-201ENST00000363985 102 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 RNU4-67P-201ENST00000364569 141 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 RNU4-75P-201ENST00000364621 146 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.573-201ENST00000384763 105 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.06□□□□□ -2.4
SSX9Q7RTT3 AC107399.1-201ENST00000451226 265 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 SCARNA8-201ENST00000515924 131 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 MIR1273G-201ENST00000577677 100 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 AC087685.1-201ENST00000587507 141 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 AC023932.2-201ENST00000603176 175 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 AC087588.2-201ENST00000617667 426 ntBASIC0.06□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.146-201ENST00000363549 102 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 SNORA1.2-201ENST00000365189 134 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.476-201ENST00000384347 108 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.482-201ENST00000384377 111 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.592-201ENST00000410274 109 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 RNU6-847P-201ENST00000411115 108 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 AC073261.1-201ENST00000429409 121 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 RNU6-470P-201ENST00000515954 104 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 RNA5SP94-201ENST00000516917 108 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 RNU7-116P-201ENST00000516940 62 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 AP003327.1-201ENST00000529684 127 ntBASIC0.05□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.72-201ENST00000362894 103 ntBASIC0.04□□□□□ -2.4
SSX9Q7RTT3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.04□□□□□ -2.4
SSX9Q7RTT3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.04□□□□□ -2.4
SSX9Q7RTT3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
SSX9Q7RTT3 RNU6-710P-201ENST00000410424 105 ntBASIC0.04□□□□□ -2.4
SSX9Q7RTT3 RPL23AP54-201ENST00000495129 419 ntBASIC0.04□□□□□ -2.4
SSX9Q7RTT3 AC024909.2-201ENST00000553035 286 ntBASIC0.04□□□□□ -2.4
SSX9Q7RTT3 RNU6-815P-201ENST00000384080 113 ntBASIC0.03□□□□□ -2.4
SSX9Q7RTT3 MIR625-201ENST00000385047 85 ntBASIC0.03□□□□□ -2.4
SSX9Q7RTT3 RNU6-510P-201ENST00000391239 108 ntBASIC0.03□□□□□ -2.4
SSX9Q7RTT3 SNORA75.4-201ENST00000391278 119 ntBASIC0.03□□□□□ -2.4
SSX9Q7RTT3 MIR938-201ENST00000401216 83 ntBASIC0.03□□□□□ -2.4
SSX9Q7RTT3 RNU7-62P-201ENST00000458856 62 ntBASIC0.03□□□□□ -2.4
SSX9Q7RTT3 RPS29P25-201ENST00000481709 171 ntBASIC0.03□□□□□ -2.4
SSX9Q7RTT3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.03□□□□□ -2.4
SSX9Q7RTT3 AC078938.1-201ENST00000620993 318 ntBASIC0.03□□□□□ -2.4
SSX9Q7RTT3 uc_338.16-201ENST00000621804 95 ntBASIC0.03□□□□□ -2.4
SSX9Q7RTT3 SNORD100-201ENST00000408573 76 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 RNU6-1156P-201ENST00000410365 100 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 MCFD2P1-201ENST00000417812 300 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 PRDX4P1-201ENST00000507189 574 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 RNU6-120P-201ENST00000516077 103 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 AC069113.3-201ENST00000521019 150 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 AC024405.2-202ENST00000532731 184 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.02□□□□□ -2.41
SSX9Q7RTT3 AC011476.5-201ENST00000615594 130 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 MIR6718-201ENST00000616153 80 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
SSX9Q7RTT3 MIR330-201ENST00000362196 94 ntBASIC0.01□□□□□ -2.41
SSX9Q7RTT3 SNORD118-201ENST00000363593 134 ntBASIC0.01□□□□□ -2.41
SSX9Q7RTT3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.01□□□□□ -2.41
SSX9Q7RTT3 Y_RNA.453-201ENST00000384223 109 ntBASIC0.01□□□□□ -2.41
SSX9Q7RTT3 SNORD116-2-201ENST00000384274 95 ntBASIC0.01□□□□□ -2.41
SSX9Q7RTT3 RNY3P4-201ENST00000384428 101 ntBASIC0.01□□□□□ -2.41
SSX9Q7RTT3 SNORD116-6-201ENST00000384711 96 ntBASIC0.01□□□□□ -2.41
SSX9Q7RTT3 SNORD78.2-201ENST00000391076 69 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms