Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.38□□□□□ -2.63
CCDC141Q6ZP82 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.38□□□□□ -2.63
CCDC141Q6ZP82 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.38□□□□□ -2.63
CCDC141Q6ZP82 AC116353.3-201ENST00000511215 249 ntBASIC-1.38□□□□□ -2.63
CCDC141Q6ZP82 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.38□□□□□ -2.63
CCDC141Q6ZP82 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.38□□□□□ -2.63
CCDC141Q6ZP82 AL391834.2-201ENST00000609982 546 ntBASIC-1.38□□□□□ -2.63
CCDC141Q6ZP82 U6.114-201ENST00000636407 96 ntBASIC-1.38□□□□□ -2.63
CCDC141Q6ZP82 SNORD64-201ENST00000386683 67 ntBASIC-1.39□□□□□ -2.63
CCDC141Q6ZP82 USP9YP21-201ENST00000420603 432 ntBASIC-1.39□□□□□ -2.63
CCDC141Q6ZP82 RPL39P25-201ENST00000449384 154 ntBASIC-1.39□□□□□ -2.63
CCDC141Q6ZP82 AC011352.1-201ENST00000512300 793 ntBASIC-1.39□□□□□ -2.63
CCDC141Q6ZP82 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.39□□□□□ -2.63
CCDC141Q6ZP82 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.39□□□□□ -2.63
CCDC141Q6ZP82 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.39□□□□□ -2.63
CCDC141Q6ZP82 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.39□□□□□ -2.63
CCDC141Q6ZP82 MIR6738-201ENST00000619620 64 ntBASIC-1.39□□□□□ -2.63
CCDC141Q6ZP82 AC009248.2-201ENST00000619826 254 ntBASIC-1.39□□□□□ -2.63
CCDC141Q6ZP82 MIR181B2-201ENST00000385004 89 ntBASIC-1.4□□□□□ -2.63
CCDC141Q6ZP82 SNORD41.1-201ENST00000391000 69 ntBASIC-1.4□□□□□ -2.63
CCDC141Q6ZP82 RPL30P16-201ENST00000419341 429 ntBASIC-1.4□□□□□ -2.63
CCDC141Q6ZP82 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.4□□□□□ -2.63
CCDC141Q6ZP82 RN7SKP19-201ENST00000516016 252 ntBASIC-1.4□□□□□ -2.63
CCDC141Q6ZP82 MTATP6P15-201ENST00000527233 835 ntBASIC-1.4□□□□□ -2.63
CCDC141Q6ZP82 MIR4473-201ENST00000583731 91 ntBASIC-1.4□□□□□ -2.63
CCDC141Q6ZP82 AC018462.2-201ENST00000605375 395 ntBASIC-1.4□□□□□ -2.63
CCDC141Q6ZP82 AP001282.2-201ENST00000616149 309 ntBASIC-1.4□□□□□ -2.63
CCDC141Q6ZP82 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 SNORA24-201ENST00000384096 131 ntBASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 USP9YP30-201ENST00000430729 455 ntBASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 SCARNA18B-201ENST00000458806 135 ntBASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 SNORD22.1-201ENST00000516331 125 ntBASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 AC005972.2-201ENST00000604690 348 ntBASIC-1.41□□□□□ -2.63
CCDC141Q6ZP82 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 RNU4-16P-201ENST00000364737 141 ntBASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 RNU6-431P-201ENST00000383874 107 ntBASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 MIR518B-201ENST00000385127 83 ntBASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 AP000676.1-201ENST00000533307 52 ntBASIC-1.42□□□□□ -2.64
CCDC141Q6ZP82 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 SNORD115-2-201ENST00000362842 82 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 RNU6-325P-201ENST00000411132 105 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 MTATP6P17-201ENST00000431030 672 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 AP000533.3-201ENST00000447704 118 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 USP9YP12-201ENST00000450481 570 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 MTCO2P29-201ENST00000465212 189 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 uc_338.10-201ENST00000621872 182 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 RNU6-702P-201ENST00000364982 107 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 RNU6-442P-201ENST00000383968 104 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 RNU6-900P-201ENST00000384498 102 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 AC022137.1-201ENST00000483735 151 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 AC069113.1-201ENST00000517763 267 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 MIR4775-201ENST00000581168 75 ntBASIC-1.43□□□□□ -2.64
CCDC141Q6ZP82 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.44□□□□□ -2.64
CCDC141Q6ZP82 RNU6-541P-201ENST00000384709 110 ntBASIC-1.44□□□□□ -2.64
CCDC141Q6ZP82 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.44□□□□□ -2.64
CCDC141Q6ZP82 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.44□□□□□ -2.64
CCDC141Q6ZP82 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.44□□□□□ -2.64
CCDC141Q6ZP82 RNA5SP33-201ENST00000516687 98 ntBASIC-1.44□□□□□ -2.64
CCDC141Q6ZP82 AL512506.1-201ENST00000613918 449 ntBASIC-1.44□□□□□ -2.64
CCDC141Q6ZP82 MTND5P17-201ENST00000418405 1603 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 RNU6-454P-201ENST00000364292 107 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 RNU6-169P-201ENST00000365336 107 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 MIR539-201ENST00000365690 78 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 RNU6-10P-201ENST00000384036 107 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 RNU6-767P-201ENST00000384132 107 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 RNU6-24P-201ENST00000384440 107 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 USP9YP16-201ENST00000430287 407 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 snoU13.13-201ENST00000458842 104 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 RNU6-437P-201ENST00000459408 95 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 DEFB131E-201ENST00000532329 154 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 TUSC7.1-201ENST00000610969 165 ntBASIC-1.45□□□□□ -2.64
CCDC141Q6ZP82 RNU6-597P-201ENST00000365620 102 ntBASIC-1.46□□□□□ -2.64
CCDC141Q6ZP82 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.46□□□□□ -2.64
CCDC141Q6ZP82 RNU6-159P-201ENST00000391080 106 ntBASIC-1.46□□□□□ -2.64
CCDC141Q6ZP82 RNA5SP261-201ENST00000410536 106 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms