Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AL603910.2-201ENST00000407268 136 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 MIR1323-201ENST00000408090 73 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 RPL23AP54-201ENST00000495129 419 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 RNA5SP458-201ENST00000516188 119 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 AL021707.8-201ENST00000609428 183 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 AC027279.3-201ENST00000625055 122 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 AC134026.1-201ENST00000623249 2239 ntBASIC1.74□□□□□ -2.13
SYNE3Q6ZMZ3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.73□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.73□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.478-201ENST00000384358 107 ntBASIC1.73□□□□□ -2.13
SYNE3Q6ZMZ3 MIR526A2-201ENST00000390198 65 ntBASIC1.73□□□□□ -2.13
SYNE3Q6ZMZ3 MTCO2P33-201ENST00000402100 465 ntBASIC1.73□□□□□ -2.13
SYNE3Q6ZMZ3 AL354695.1-201ENST00000427935 228 ntBASIC1.73□□□□□ -2.13
SYNE3Q6ZMZ3 CALM2P4-201ENST00000430810 426 ntBASIC1.73□□□□□ -2.13
SYNE3Q6ZMZ3 AC011921.3-201ENST00000605540 361 ntBASIC1.73□□□□□ -2.13
SYNE3Q6ZMZ3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-1205P-201ENST00000363625 106 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 RNU6-457P-201ENST00000363999 107 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 MIR320A-201ENST00000385302 82 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 U8.16-201ENST00000391279 133 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 RN7SKP51-201ENST00000410781 304 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 RNU1-98P-201ENST00000458992 160 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 AC005908.1-201ENST00000468701 347 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 CYCTP-201ENST00000504253 315 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 RNA5SP168-201ENST00000516642 112 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 MIR4643-201ENST00000577473 78 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 MIR2681-201ENST00000581814 105 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 AC087685.1-201ENST00000587507 141 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 BX284668.6-201ENST00000606899 438 ntBASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE3Q6ZMZ3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.71□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.117-201ENST00000363294 101 ntBASIC1.71□□□□□ -2.14
SYNE3Q6ZMZ3 RNU6-574P-201ENST00000384265 107 ntBASIC1.71□□□□□ -2.14
SYNE3Q6ZMZ3 RNU6-651P-201ENST00000411040 105 ntBASIC1.71□□□□□ -2.14
SYNE3Q6ZMZ3 SNRPGP13-201ENST00000442212 177 ntBASIC1.71□□□□□ -2.14
SYNE3Q6ZMZ3 SNORD11-201ENST00000459124 84 ntBASIC1.71□□□□□ -2.14
SYNE3Q6ZMZ3 RNU6-1023P-201ENST00000516137 106 ntBASIC1.71□□□□□ -2.14
SYNE3Q6ZMZ3 AC100767.1-201ENST00000528178 123 ntBASIC1.71□□□□□ -2.14
SYNE3Q6ZMZ3 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
SYNE3Q6ZMZ3 RNU6-833P-201ENST00000363486 107 ntBASIC1.7□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.304-201ENST00000365011 112 ntBASIC1.7□□□□□ -2.14
SYNE3Q6ZMZ3 MIR1278-201ENST00000408753 81 ntBASIC1.7□□□□□ -2.14
SYNE3Q6ZMZ3 snoU13.9-201ENST00000458927 103 ntBASIC1.7□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.680-201ENST00000516441 93 ntBASIC1.7□□□□□ -2.14
SYNE3Q6ZMZ3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE3Q6ZMZ3 MIR4303-201ENST00000581299 66 ntBASIC1.7□□□□□ -2.14
SYNE3Q6ZMZ3 AC120024.3-201ENST00000603167 156 ntBASIC1.7□□□□□ -2.14
SYNE3Q6ZMZ3 RNU6-1209P-201ENST00000363655 107 ntBASIC1.69□□□□□ -2.14
SYNE3Q6ZMZ3 RNY1-201ENST00000364228 113 ntBASIC1.69□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.539-201ENST00000384635 107 ntBASIC1.69□□□□□ -2.14
SYNE3Q6ZMZ3 MT-TG-201ENST00000387429 68 ntBASIC1.69□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.69□□□□□ -2.14
SYNE3Q6ZMZ3 SNRPGP10-201ENST00000432323 225 ntBASIC1.69□□□□□ -2.14
SYNE3Q6ZMZ3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.69□□□□□ -2.14
SYNE3Q6ZMZ3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.69□□□□□ -2.14
SYNE3Q6ZMZ3 ICE2P2-201ENST00000483823 2787 ntBASIC1.69□□□□□ -2.14
SYNE3Q6ZMZ3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.68□□□□□ -2.14
SYNE3Q6ZMZ3 U8.1-201ENST00000362843 134 ntBASIC1.68□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.447-201ENST00000384184 113 ntBASIC1.68□□□□□ -2.14
SYNE3Q6ZMZ3 MIR513A1-201ENST00000385138 129 ntBASIC1.68□□□□□ -2.14
SYNE3Q6ZMZ3 RNA5SP496-201ENST00000391240 109 ntBASIC1.68□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.590-201ENST00000410140 107 ntBASIC1.68□□□□□ -2.14
SYNE3Q6ZMZ3 AC245517.4-201ENST00000448601 281 ntBASIC1.68□□□□□ -2.14
SYNE3Q6ZMZ3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.76-201ENST00000362931 109 ntBASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.307-201ENST00000365022 117 ntBASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 MIR653-201ENST00000385279 96 ntBASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 AC027119.1-201ENST00000440877 241 ntBASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 MIR4422-201ENST00000581938 83 ntBASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 AL442067.1-201ENST00000613261 223 ntBASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.802-201ENST00000614892 130 ntBASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 SNORD3E-202ENST00000627253 216 ntBASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE3Q6ZMZ3 ZNF209P-201ENST00000593450 2304 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 SNORD33-201ENST00000362761 85 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 RNU6-653P-201ENST00000363074 106 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 SNORD68-201ENST00000363214 84 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.277-201ENST00000364754 102 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 SNORD1A-201ENST00000364968 72 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 RNU1-78P-201ENST00000391248 165 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 AC108667.1-201ENST00000428618 249 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 COX6CP14-201ENST00000469580 174 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 RNU1-92P-201ENST00000517017 135 ntBASIC1.66□□□□□ -2.14
SYNE3Q6ZMZ3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms