Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 RNU6-765P-201ENST00000516916 99 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 DEFB131E-201ENST00000532329 154 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 PIGPP4-201ENST00000584447 307 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 AP000942.4-201ENST00000604811 241 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 AP001330.5-201ENST00000607176 411 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 AC023510.2-201ENST00000622162 746 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 Z97988.1-201ENST00000637697 135 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 SNORD115-42-201ENST00000364273 82 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 SNORA20.2-201ENST00000383922 131 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 MTND4P3-201ENST00000417829 541 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 MTND1P12-201ENST00000455231 147 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 RNU7-138P-201ENST00000459479 64 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 AC022616.4-201ENST00000522985 181 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 AC140658.3-201ENST00000567603 271 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 AL158209.2-201ENST00000619266 216 ntBASIC-0.78□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.79□□□□□ -2.54
CSPG4Q6UVK1 RNU6-434P-201ENST00000384376 107 ntBASIC-0.79□□□□□ -2.54
CSPG4Q6UVK1 MIR9-2-201ENST00000384838 87 ntBASIC-0.79□□□□□ -2.54
CSPG4Q6UVK1 RNA5SP494-201ENST00000410653 129 ntBASIC-0.79□□□□□ -2.54
CSPG4Q6UVK1 AC096949.1-201ENST00000412047 152 ntBASIC-0.79□□□□□ -2.54
CSPG4Q6UVK1 SNORD123-201ENST00000459473 70 ntBASIC-0.79□□□□□ -2.54
CSPG4Q6UVK1 GMFBP1-201ENST00000467831 427 ntBASIC-0.79□□□□□ -2.54
CSPG4Q6UVK1 MIR4307-201ENST00000582802 84 ntBASIC-0.79□□□□□ -2.54
CSPG4Q6UVK1 MIR6082-201ENST00000613604 109 ntBASIC-0.79□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.79□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-926P-201ENST00000384075 107 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-784P-201ENST00000384330 106 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-883P-201ENST00000384597 107 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 ELOCP4-201ENST00000420090 333 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-437P-201ENST00000459408 95 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RPL30P10-201ENST00000488148 337 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 AC010598.1-201ENST00000510378 103 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU2-13P-201ENST00000515909 113 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-612P-201ENST00000516909 102 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 AC091912.2-201ENST00000624798 167 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 MTND5P18-201ENST00000445624 1801 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 MIR30D-201ENST00000362283 70 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-609P-201ENST00000365459 107 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 SNORD24-201ENST00000383884 75 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 SNORA24.1-201ENST00000384401 135 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 MIR181B2-201ENST00000385004 89 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 MIR617-201ENST00000385030 97 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 SNORD41.1-201ENST00000391000 69 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-721P-201ENST00000410155 105 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 USP9YP16-201ENST00000430287 407 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU7-67P-201ENST00000459003 62 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNU6-274P-201ENST00000459566 107 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 RNA5SP20-201ENST00000515976 84 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 SNORA25.14-201ENST00000516481 132 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 MIR3684-201ENST00000579779 74 ntBASIC-0.8□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 RNU6-266P-201ENST00000364225 107 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 RNU6-431P-201ENST00000383874 107 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 SNORA22B-201ENST00000383876 138 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 RNU6-769P-201ENST00000384407 104 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 AL590002.1-201ENST00000406554 418 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 RNU4-55P-201ENST00000410731 137 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 RPL30P15-201ENST00000457129 321 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 AC011352.1-201ENST00000512300 793 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 RNU6-201P-201ENST00000517100 61 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 AC007012.1-201ENST00000567192 175 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 RNU6-85P-201ENST00000605989 107 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 SNORD115-30-201ENST00000364117 82 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 RNU6-767P-201ENST00000384132 107 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 AC073464.1-201ENST00000429823 534 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 USP9YP12-201ENST00000450481 570 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 RNA5SP33-201ENST00000516687 98 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 ELOCP32-201ENST00000548625 324 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 MTND4LP25-201ENST00000570218 163 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 uc_338.10-201ENST00000621872 182 ntBASIC-0.81□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 RNU6-933P-201ENST00000384424 107 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 SNORD70.1-201ENST00000391007 85 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 RNU6-983P-201ENST00000516004 103 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms