Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 MIR5188-201ENST00000583467 113 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 AP003357.1-201ENST00000604497 148 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 PVT1_3.1-201ENST00000620853 95 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.73□□□□□ -2.29
ATL3Q6DD88 MIR1302-1-201ENST00000637932 143 ntBASIC0.73□□□□□ -2.29
ATL3Q6DD88 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
ATL3Q6DD88 Y_RNA.70-201ENST00000362886 110 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 Y_RNA.252-201ENST00000364556 101 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 snoU2-30.1-201ENST00000365012 70 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 Y_RNA.341-201ENST00000365341 102 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 MIR1302-7-201ENST00000408841 72 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.72□□□□□ -2.29
ATL3Q6DD88 SNORD19B-201ENST00000459623 84 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 HMGN1P10-201ENST00000474557 553 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 AC010655.3-201ENST00000478818 450 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 RNU6-875P-201ENST00000516488 106 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.72□□□□□ -2.29
ATL3Q6DD88 AC005730.3-201ENST00000583067 366 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 POLR3GP1-201ENST00000594073 261 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 SEPT14P17-201ENST00000617978 177 ntBASIC0.72□□□□□ -2.29
ATL3Q6DD88 U8.7-201ENST00000364940 136 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 SNORD63-201ENST00000384262 68 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 RNU6-131P-201ENST00000391144 107 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 RNU6-855P-201ENST00000410395 104 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 AL390729.2-201ENST00000416137 156 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 SNRPGP14-201ENST00000435400 219 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 AL392103.1-201ENST00000447000 198 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 SNORD123-201ENST00000459473 70 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 RNU7-43P-201ENST00000516554 64 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 SNORA18.7-201ENST00000516910 131 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 RNU7-116P-201ENST00000516940 62 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 AC131055.1-201ENST00000584626 316 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 DEFB117-201ENST00000602356 141 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 AC092447.9-201ENST00000603395 144 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 SNORD58B-201ENST00000607313 66 ntBASIC0.71□□□□□ -2.3
ATL3Q6DD88 SNORA25.3-201ENST00000363205 127 ntBASIC0.7□□□□□ -2.3
ATL3Q6DD88 RNU1-115P-201ENST00000365329 160 ntBASIC0.7□□□□□ -2.3
ATL3Q6DD88 Y_RNA.354-201ENST00000365448 111 ntBASIC0.7□□□□□ -2.3
ATL3Q6DD88 RNU6-110P-201ENST00000384508 104 ntBASIC0.7□□□□□ -2.3
ATL3Q6DD88 AL590004.1-201ENST00000405321 300 ntBASIC0.7□□□□□ -2.3
ATL3Q6DD88 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.7□□□□□ -2.3
ATL3Q6DD88 RNU7-115P-201ENST00000516433 55 ntBASIC0.7□□□□□ -2.3
ATL3Q6DD88 SNORA40.14-201ENST00000516543 86 ntBASIC0.7□□□□□ -2.3
ATL3Q6DD88 AL121655.1-201ENST00000605811 308 ntBASIC0.7□□□□□ -2.3
ATL3Q6DD88 Y_RNA.203-201ENST00000364106 102 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 Y_RNA.331-201ENST00000365267 102 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 MIR193B-201ENST00000384907 83 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 AL035398.1-201ENST00000430869 322 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 AC005534.2-201ENST00000431047 433 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 HMGN2P32-201ENST00000444648 269 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 RNU6-830P-201ENST00000516353 107 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 AC024405.2-202ENST00000532731 184 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 CYP3A137P-201ENST00000562436 69 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 MIR548AR-201ENST00000582191 57 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 Y_RNA.772-201ENST00000606692 102 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.69□□□□□ -2.3
ATL3Q6DD88 AL606534.2-204ENST00000635008 178 ntBASIC0.69□□□□□ -2.3
ATL3Q6DD88 MIR103A2-201ENST00000362154 78 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 Y_RNA.80-201ENST00000362996 102 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 SNORD14.1-201ENST00000365609 90 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 Y_RNA.485-201ENST00000384395 102 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 Y_RNA.529-201ENST00000384586 119 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 Y_RNA.551-201ENST00000384661 102 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 MIR15B-201ENST00000385045 98 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 NDUFA4P2-201ENST00000489989 244 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 RNU11-2P-201ENST00000516898 142 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 AC109810.1-201ENST00000534066 224 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.68□□□□□ -2.3
ATL3Q6DD88 AC007742.2-201ENST00000618226 398 ntBASIC0.68□□□□□ -2.3
ATL3Q6DD88 AC134026.1-201ENST00000623249 2239 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 RNU6-1209P-201ENST00000363655 107 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 Y_RNA.263-201ENST00000364659 114 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 Y_RNA.540-201ENST00000384638 111 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 MIR605-201ENST00000385078 83 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 SNORD28B-201ENST00000390993 75 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.67□□□□□ -2.3
ATL3Q6DD88 AL160004.2-201ENST00000432935 350 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.67□□□□□ -2.3
ATL3Q6DD88 Y_RNA.714-201ENST00000517065 90 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 AC036111.3-201ENST00000526389 112 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 AP003484.1-201ENST00000530974 250 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 AC127455.1-201ENST00000565496 145 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 AC025627.3-201ENST00000582078 182 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 AC011373.1-201ENST00000607270 237 ntBASIC0.67□□□□□ -2.3
ATL3Q6DD88 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
ATL3Q6DD88 RNU6-801P-201ENST00000364087 105 ntBASIC0.66□□□□□ -2.3
ATL3Q6DD88 Y_RNA.315-201ENST00000365117 102 ntBASIC0.66□□□□□ -2.3
ATL3Q6DD88 Y_RNA.330-201ENST00000365230 109 ntBASIC0.66□□□□□ -2.3
ATL3Q6DD88 RNU6-1335P-201ENST00000365426 107 ntBASIC0.66□□□□□ -2.3
ATL3Q6DD88 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
ATL3Q6DD88 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.66□□□□□ -2.3
ATL3Q6DD88 RNU6-1132P-201ENST00000459214 107 ntBASIC0.66□□□□□ -2.3
ATL3Q6DD88 U7.7-201ENST00000459276 60 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms