Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 MIR4680-201ENST00000580906 66 ntBASIC1.33□□□□□ -2.2
SNX30Q5VWJ9 AL356055.1-201ENST00000602528 446 ntBASIC1.33□□□□□ -2.2
SNX30Q5VWJ9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.33□□□□□ -2.2
SNX30Q5VWJ9 SNORD14E-201ENST00000364009 85 ntBASIC1.32□□□□□ -2.2
SNX30Q5VWJ9 RNU6-290P-201ENST00000365212 101 ntBASIC1.32□□□□□ -2.2
SNX30Q5VWJ9 RNU6-514P-201ENST00000384208 107 ntBASIC1.32□□□□□ -2.2
SNX30Q5VWJ9 Y_RNA.527-201ENST00000384573 102 ntBASIC1.32□□□□□ -2.2
SNX30Q5VWJ9 MIR526A1-201ENST00000384897 85 ntBASIC1.32□□□□□ -2.2
SNX30Q5VWJ9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
SNX30Q5VWJ9 RNU6-437P-201ENST00000459408 95 ntBASIC1.32□□□□□ -2.2
SNX30Q5VWJ9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.32□□□□□ -2.2
SNX30Q5VWJ9 RNU6-191P-201ENST00000516295 94 ntBASIC1.32□□□□□ -2.2
SNX30Q5VWJ9 SNORD111.1-201ENST00000516421 86 ntBASIC1.32□□□□□ -2.2
SNX30Q5VWJ9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 RNU6-674P-201ENST00000363831 107 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 RNU6-770P-201ENST00000363929 105 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 RNU6-899P-201ENST00000363947 107 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 RNU6-53P-201ENST00000365367 106 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 RNU6-969P-201ENST00000383900 105 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 Y_RNA.418-201ENST00000384029 102 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 MIR222-201ENST00000384992 110 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 SNORA36B-201ENST00000410438 131 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 RNU7-141P-201ENST00000459304 62 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 SNORA31.2-201ENST00000516019 134 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 RNY3P15-201ENST00000516297 97 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 SNORA70.22-201ENST00000517160 124 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 AC113195.1-201ENST00000579952 141 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 AL512605.2-201ENST00000592972 256 ntBASIC1.31□□□□□ -2.2
SNX30Q5VWJ9 RNU6-639P-201ENST00000384074 107 ntBASIC1.3□□□□□ -2.2
SNX30Q5VWJ9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SNX30Q5VWJ9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SNX30Q5VWJ9 ELOCP20-201ENST00000422460 345 ntBASIC1.3□□□□□ -2.2
SNX30Q5VWJ9 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
SNX30Q5VWJ9 SNORA25.1-201ENST00000362326 128 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 Y_RNA.26-201ENST00000362539 101 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 Y_RNA.210-201ENST00000364161 110 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 Y_RNA.214-201ENST00000364201 112 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 RNU6-806P-201ENST00000365147 105 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 RNU6-144P-201ENST00000383951 107 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 RNU2-14P-201ENST00000411053 191 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 AC005534.2-201ENST00000431047 433 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 AC245047.7-201ENST00000440265 293 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 RNU2-31P-201ENST00000516954 155 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 AL022345.2-201ENST00000606307 135 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 BX284668.6-201ENST00000606899 438 ntBASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.29□□□□□ -2.2
SNX30Q5VWJ9 Y_RNA.19-201ENST00000362462 99 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 Y_RNA.153-201ENST00000363615 91 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 RNU6-1048P-201ENST00000364054 107 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 RNU6-801P-201ENST00000364087 105 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 SNORD50B-201ENST00000364995 70 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 RNU6-326P-201ENST00000365480 107 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 RNU6-442P-201ENST00000383968 104 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 SNORD38C-201ENST00000384381 69 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 MTCO1P5-201ENST00000433573 344 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 AC023449.1-201ENST00000454464 154 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 AC098869.1-201ENST00000481627 292 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 RNU6-764P-201ENST00000516396 105 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 MIR8070-201ENST00000616510 88 ntBASIC1.28□□□□□ -2.2
SNX30Q5VWJ9 snoU2_19.2-201ENST00000363024 80 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 RNU6-1209P-201ENST00000363655 107 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 Y_RNA.796-201ENST00000364268 102 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 Y_RNA.238-201ENST00000364441 102 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 Y_RNA.799-201ENST00000364992 102 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 SNORA33.2-201ENST00000365413 134 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 RNU6-1227P-201ENST00000383981 107 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 SNORA70.7-201ENST00000384159 133 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 SNORD12-201ENST00000391002 90 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 RPL21P38-201ENST00000418090 167 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 RN7SKP179-201ENST00000516126 217 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 AC090142.3-201ENST00000519012 385 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 AC005357.1-201ENST00000588399 301 ntBASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.27□□□□□ -2.21
SNX30Q5VWJ9 RNU6-1205P-201ENST00000363625 106 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 Y_RNA.422-201ENST00000384054 114 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 MIR215-201ENST00000384858 110 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 MIR516B2-201ENST00000385190 85 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 SNORA26.5-201ENST00000391215 123 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 MTCO2P33-201ENST00000402100 465 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 AC048334.1-201ENST00000477975 159 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 RNU7-43P-201ENST00000516554 64 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 SNORA74.3-201ENST00000517108 154 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
SNX30Q5VWJ9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SNX30Q5VWJ9 RNU6-985P-201ENST00000410182 104 ntBASIC1.25□□□□□ -2.21
SNX30Q5VWJ9 AL731563.1-201ENST00000442202 214 ntBASIC1.25□□□□□ -2.21
SNX30Q5VWJ9 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms