Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MIR6852-201ENST00000621699 66 ntBASIC3.96□□□□□ -1.78
VARS2Q5ST30 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VARS2Q5ST30 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VARS2Q5ST30 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VARS2Q5ST30 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VARS2Q5ST30 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VARS2Q5ST30 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VARS2Q5ST30 SNORA31-201ENST00000362607 130 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 SNORD114-10-201ENST00000363409 72 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 SNORA1.2-201ENST00000365189 134 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 MIR515-2-201ENST00000384883 83 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 MIR515-1-201ENST00000384884 83 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 RNA5SP292-201ENST00000390974 118 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 RNU6-602P-201ENST00000411155 105 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 RPS29P29-201ENST00000456396 171 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 RNU7-67P-201ENST00000459003 62 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 AL163195.1-201ENST00000496941 348 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 RNU6-991P-201ENST00000516168 107 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 MIR2114-201ENST00000516645 80 ntBASIC3.95□□□□□ -1.78
VARS2Q5ST30 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VARS2Q5ST30 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VARS2Q5ST30 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
VARS2Q5ST30 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VARS2Q5ST30 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VARS2Q5ST30 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VARS2Q5ST30 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VARS2Q5ST30 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
VARS2Q5ST30 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VARS2Q5ST30 HSBP1P2-201ENST00000299671 229 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 RNU6-669P-201ENST00000365575 107 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 RNU6-811P-201ENST00000384069 107 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 RNU6-163P-201ENST00000384396 106 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 RNU6-913P-201ENST00000390913 95 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 AC017083.1-201ENST00000428093 483 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 AC245047.7-201ENST00000440265 293 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 RNU7-73P-201ENST00000458743 63 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 AC006483.1-201ENST00000487308 313 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 RNU7-137P-201ENST00000516788 62 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 RNU6-1116P-201ENST00000517269 99 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 AC105081.1-201ENST00000617727 106 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 AP001362.1-201ENST00000625165 124 ntBASIC3.94□□□□□ -1.78
VARS2Q5ST30 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VARS2Q5ST30 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VARS2Q5ST30 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VARS2Q5ST30 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VARS2Q5ST30 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
VARS2Q5ST30 RNU6-208P-201ENST00000362431 107 ntBASIC3.93□□□□□ -1.78
VARS2Q5ST30 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
VARS2Q5ST30 SNORD6-201ENST00000365444 73 ntBASIC3.93□□□□□ -1.78
VARS2Q5ST30 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.93□□□□□ -1.78
VARS2Q5ST30 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.93□□□□□ -1.78
VARS2Q5ST30 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.93□□□□□ -1.78
VARS2Q5ST30 RN7SL601P-201ENST00000471221 293 ntBASIC3.93□□□□□ -1.78
VARS2Q5ST30 AC020914.4-201ENST00000597690 277 ntBASIC3.93□□□□□ -1.78
VARS2Q5ST30 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.93□□□□□ -1.78
VARS2Q5ST30 AC027279.3-201ENST00000625055 122 ntBASIC3.93□□□□□ -1.78
VARS2Q5ST30 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.93□□□□□ -1.78
VARS2Q5ST30 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VARS2Q5ST30 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
VARS2Q5ST30 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.93□□□□□ -1.78
VARS2Q5ST30 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VARS2Q5ST30 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VARS2Q5ST30 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VARS2Q5ST30 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VARS2Q5ST30 Y_RNA.370-201ENST00000365589 108 ntBASIC3.92□□□□□ -1.78
VARS2Q5ST30 MIR128-1-201ENST00000384921 82 ntBASIC3.92□□□□□ -1.78
VARS2Q5ST30 AL357552.1-201ENST00000445254 415 ntBASIC3.92□□□□□ -1.78
VARS2Q5ST30 SNORD105B-201ENST00000458770 79 ntBASIC3.92□□□□□ -1.78
VARS2Q5ST30 Y_RNA.648-201ENST00000459455 110 ntBASIC3.92□□□□□ -1.78
VARS2Q5ST30 TRBV12-1-201ENST00000479785 344 ntBASIC3.92□□□□□ -1.78
VARS2Q5ST30 SNORA18.5-201ENST00000516616 101 ntBASIC3.92□□□□□ -1.78
VARS2Q5ST30 AC008011.1-201ENST00000545989 227 ntBASIC3.92□□□□□ -1.78
VARS2Q5ST30 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.92□□□□□ -1.78
VARS2Q5ST30 AP000553.6-201ENST00000641242 118 ntBASIC3.92□□□□□ -1.78
VARS2Q5ST30 AP001486.2-201ENST00000561652 5113 ntBASIC3.92□□□□□ -1.78
VARS2Q5ST30 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VARS2Q5ST30 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VARS2Q5ST30 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
VARS2Q5ST30 SNORD9-201ENST00000362566 104 ntBASIC3.91□□□□□ -1.78
VARS2Q5ST30 RNU1-89P-201ENST00000384592 164 ntBASIC3.91□□□□□ -1.78
VARS2Q5ST30 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VARS2Q5ST30 RNU6-1086P-201ENST00000410930 100 ntBASIC3.91□□□□□ -1.78
VARS2Q5ST30 SRIP3-201ENST00000413200 219 ntBASIC3.91□□□□□ -1.78
VARS2Q5ST30 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VARS2Q5ST30 RN7SL297P-201ENST00000483161 293 ntBASIC3.91□□□□□ -1.78
VARS2Q5ST30 TRBV12-2-201ENST00000489763 344 ntBASIC3.91□□□□□ -1.78
VARS2Q5ST30 RNU6-977P-201ENST00000516411 103 ntBASIC3.91□□□□□ -1.78
VARS2Q5ST30 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.91□□□□□ -1.78
VARS2Q5ST30 AC012531.5-201ENST00000611375 151 ntBASIC3.91□□□□□ -1.78
VARS2Q5ST30 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VARS2Q5ST30 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.9□□□□□ -1.79
VARS2Q5ST30 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VARS2Q5ST30 MIRLET7C-201ENST00000362160 84 ntBASIC3.9□□□□□ -1.79
VARS2Q5ST30 Y_RNA.443-201ENST00000384135 111 ntBASIC3.9□□□□□ -1.79
VARS2Q5ST30 SNORA8.1-201ENST00000384250 140 ntBASIC3.9□□□□□ -1.79
VARS2Q5ST30 AL159169.1-201ENST00000421119 127 ntBASIC3.9□□□□□ -1.79
VARS2Q5ST30 CYCSP4-201ENST00000429682 331 ntBASIC3.9□□□□□ -1.79
VARS2Q5ST30 AC115115.1-201ENST00000449927 248 ntBASIC3.9□□□□□ -1.79
VARS2Q5ST30 UBE2DNL-203ENST00000474922 222 ntBASIC3.9□□□□□ -1.79
VARS2Q5ST30 RNU7-79P-201ENST00000516082 62 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms