Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MIR8063-201ENST00000621930 81 ntBASIC1.66□□□□□ -2.14
RUNDC3AQ59EK9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
RUNDC3AQ59EK9 SNORD114-1-201ENST00000362705 72 ntBASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.269-201ENST00000364685 89 ntBASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.304-201ENST00000365011 112 ntBASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.572-201ENST00000384757 98 ntBASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 MIR9-3-201ENST00000385084 90 ntBASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 SNORA40.18-201ENST00000391200 128 ntBASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 MIR1289-2-201ENST00000408360 111 ntBASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 snoU13.26-201ENST00000459452 105 ntBASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.802-201ENST00000614892 130 ntBASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 AC027279.3-201ENST00000625055 122 ntBASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.292-201ENST00000364904 97 ntBASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 SNORD50B-201ENST00000364995 70 ntBASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 RNA5SP259-201ENST00000365541 109 ntBASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 RNU6-163P-201ENST00000384396 106 ntBASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 AC019129.1-201ENST00000403786 261 ntBASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 RN7SKP101-201ENST00000411376 320 ntBASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 RNU6-111P-201ENST00000517179 105 ntBASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 AL365265.1-201ENST00000621045 234 ntBASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.64□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.65-201ENST00000362846 100 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 RNU6-653P-201ENST00000363074 106 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 RNU6-833P-201ENST00000363486 107 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 SNORA20.1-201ENST00000364790 130 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 SNORD1A-201ENST00000364968 72 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.401-201ENST00000383965 117 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 SNORA8.3-201ENST00000384679 139 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 MIR626-201ENST00000385032 94 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 MIR934-201ENST00000401241 83 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 snoU13.15-201ENST00000459407 104 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 UBL5P3-201ENST00000475112 231 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 AC092991.1-201ENST00000477176 376 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 SNORD45.4-201ENST00000516629 73 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 AC110588.1-201ENST00000559699 137 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 AC006006.1-201ENST00000603082 144 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 AC106754.2-201ENST00000623006 233 ntBASIC1.63□□□□□ -2.15
RUNDC3AQ59EK9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.24-201ENST00000362508 103 ntBASIC1.62□□□□□ -2.15
RUNDC3AQ59EK9 RNU6-457P-201ENST00000363999 107 ntBASIC1.62□□□□□ -2.15
RUNDC3AQ59EK9 MIR891A-201ENST00000401237 79 ntBASIC1.62□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.618-201ENST00000410949 107 ntBASIC1.62□□□□□ -2.15
RUNDC3AQ59EK9 RNA5SP182-201ENST00000516064 82 ntBASIC1.62□□□□□ -2.15
RUNDC3AQ59EK9 AC019176.1-201ENST00000518519 225 ntBASIC1.62□□□□□ -2.15
RUNDC3AQ59EK9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.62□□□□□ -2.15
RUNDC3AQ59EK9 AL365434.2-201ENST00000607979 234 ntBASIC1.62□□□□□ -2.15
RUNDC3AQ59EK9 RNU6-199P-201ENST00000362954 107 ntBASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 snoU2-30.1-201ENST00000365012 70 ntBASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 RNY4P28-201ENST00000365281 93 ntBASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 MIR526A1-201ENST00000384897 85 ntBASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 RNA5SP496-201ENST00000391240 109 ntBASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.714-201ENST00000517065 90 ntBASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 MIR5688-201ENST00000580619 83 ntBASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 AC008507.4-201ENST00000585464 127 ntBASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 AC087685.1-201ENST00000587507 141 ntBASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RUNDC3AQ59EK9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 RNU6-1084P-201ENST00000362498 107 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.188-201ENST00000363952 111 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 snoU2_19.4-201ENST00000364329 80 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 Y_RNA.229-201ENST00000364347 113 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 SNORD72-201ENST00000390994 80 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 RN7SKP51-201ENST00000410781 304 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 AC027119.1-201ENST00000440877 241 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 RNU6-917P-201ENST00000516294 104 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 RNU6-1271P-201ENST00000517049 105 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 CBX3P4-201ENST00000538909 354 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 AL049861.1-201ENST00000603130 150 ntBASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RUNDC3AQ59EK9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RUNDC3AQ59EK9 RNY1-201ENST00000364228 113 ntBASIC1.59□□□□□ -2.15
RUNDC3AQ59EK9 MIR583-201ENST00000384846 75 ntBASIC1.59□□□□□ -2.15
RUNDC3AQ59EK9 MT-TG-201ENST00000387429 68 ntBASIC1.59□□□□□ -2.15
RUNDC3AQ59EK9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.59□□□□□ -2.15
RUNDC3AQ59EK9 AC245047.8-201ENST00000456455 284 ntBASIC1.59□□□□□ -2.15
RUNDC3AQ59EK9 AC079140.2-201ENST00000506193 142 ntBASIC1.59□□□□□ -2.15
RUNDC3AQ59EK9 RNU4-71P-201ENST00000516258 113 ntBASIC1.59□□□□□ -2.15
RUNDC3AQ59EK9 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
RUNDC3AQ59EK9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 Y_RNA.262-201ENST00000364641 102 ntBASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 Y_RNA.489-201ENST00000384410 101 ntBASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-381P-201ENST00000391259 108 ntBASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 MIR1298-201ENST00000408783 112 ntBASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 HMGN2P32-201ENST00000444648 269 ntBASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 RNY3P16-201ENST00000516338 101 ntBASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 MIR4285-201ENST00000581001 85 ntBASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 uc_338.4-201ENST00000616635 176 ntBASIC1.58□□□□□ -2.16
RUNDC3AQ59EK9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-379P-201ENST00000363813 104 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms