Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 Y_RNA.44-201ENST00000362676 108 ntBASIC1.56□□□□□ -2.16
USP41Q3LFD5 Y_RNA.203-201ENST00000364106 102 ntBASIC1.56□□□□□ -2.16
USP41Q3LFD5 Y_RNA.253-201ENST00000364562 112 ntBASIC1.56□□□□□ -2.16
USP41Q3LFD5 MIR660-201ENST00000385235 97 ntBASIC1.56□□□□□ -2.16
USP41Q3LFD5 MIR1287-201ENST00000408492 90 ntBASIC1.56□□□□□ -2.16
USP41Q3LFD5 RNU7-12P-201ENST00000516030 62 ntBASIC1.56□□□□□ -2.16
USP41Q3LFD5 RNU6-970P-201ENST00000516312 107 ntBASIC1.56□□□□□ -2.16
USP41Q3LFD5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.56□□□□□ -2.16
USP41Q3LFD5 AC015688.6-201ENST00000577737 104 ntBASIC1.56□□□□□ -2.16
USP41Q3LFD5 AC005357.1-201ENST00000588399 301 ntBASIC1.56□□□□□ -2.16
USP41Q3LFD5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.56□□□□□ -2.16
USP41Q3LFD5 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 RNU6-1205P-201ENST00000363625 106 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 Y_RNA.217-201ENST00000364214 105 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 Y_RNA.288-201ENST00000364854 92 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 RNU6-392P-201ENST00000364926 101 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 AC093850.1-201ENST00000454121 251 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 RNU6-437P-201ENST00000459408 95 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 Y_RNA.641-201ENST00000459414 105 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 HMGN1P7-201ENST00000491722 313 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.55□□□□□ -2.16
USP41Q3LFD5 AL078604.3-201ENST00000615580 211 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 snoU18.1-201ENST00000629629 71 ntBASIC1.55□□□□□ -2.16
USP41Q3LFD5 MIR335-201ENST00000362173 94 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 Y_RNA.117-201ENST00000363294 101 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 RNU6-163P-201ENST00000384396 106 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 RNU6-1289P-201ENST00000384431 106 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 RPL30P13-201ENST00000418873 348 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 PIGPP3-201ENST00000425307 415 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 SNRPGP10-201ENST00000432323 225 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 AC023790.1-201ENST00000482174 347 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 AC019176.1-201ENST00000518519 225 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 MIR4422-201ENST00000581938 83 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 JPX_2.1-201ENST00000614161 69 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 AL157834.3-201ENST00000615543 103 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 U2.14-201ENST00000615943 113 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 AC013791.1-201ENST00000616619 62 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 AC106754.2-201ENST00000623006 233 ntBASIC1.54□□□□□ -2.16
USP41Q3LFD5 UBE2WP1-201ENST00000362030 340 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 MIRLET7C-201ENST00000362160 84 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 U8.1-201ENST00000362843 134 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 Y_RNA.275-201ENST00000364726 110 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 Y_RNA.293-201ENST00000364908 93 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 SNORD1A-201ENST00000364968 72 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 RNU6-131P-201ENST00000391144 107 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 MIR1278-201ENST00000408753 81 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 RNU2-38P-201ENST00000410856 79 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 MIR5692C2-201ENST00000577959 77 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 AC120024.3-201ENST00000603167 156 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 AL162730.1-201ENST00000605734 292 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 AL008718.3-201ENST00000610217 321 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.53□□□□□ -2.16
USP41Q3LFD5 MIR302D-201ENST00000362275 68 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 RNU6-1084P-201ENST00000362498 107 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 Y_RNA.54-201ENST00000362766 105 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 RNU6-1209P-201ENST00000363655 107 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 RNU6-740P-201ENST00000364734 105 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 RNU6-196P-201ENST00000384315 107 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 Y_RNA.556-201ENST00000384677 113 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 MIR499A-201ENST00000384903 122 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 MIR522-201ENST00000385071 87 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 SNRPGP13-201ENST00000442212 177 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 AC079140.2-201ENST00000506193 142 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 AC114811.1-201ENST00000507207 168 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 MIR3937-201ENST00000580135 106 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 AC012433.1-201ENST00000588916 398 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 AL353770.2-201ENST00000620024 78 ntBASIC1.52□□□□□ -2.17
USP41Q3LFD5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USP41Q3LFD5 U8.5-201ENST00000364528 136 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 SNORA25.9-201ENST00000365087 128 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 RNU6-144P-201ENST00000383951 107 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 RNU6-211P-201ENST00000384047 107 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.51□□□□□ -2.17
USP41Q3LFD5 SNORD127-201ENST00000458892 86 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 CYCTP-201ENST00000504253 315 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.51□□□□□ -2.17
USP41Q3LFD5 Y_RNA.714-201ENST00000517065 90 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 RPL23AP91-201ENST00000569211 455 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 MIR2681-201ENST00000581814 105 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 AL365434.2-201ENST00000607979 234 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
USP41Q3LFD5 AC068700.1-201ENST00000565862 3754 ntBASIC1.51□□□□□ -2.17
USP41Q3LFD5 RNU6-574P-201ENST00000384265 107 ntBASIC1.5□□□□□ -2.17
USP41Q3LFD5 AL603910.2-201ENST00000407268 136 ntBASIC1.5□□□□□ -2.17
USP41Q3LFD5 Y_RNA.590-201ENST00000410140 107 ntBASIC1.5□□□□□ -2.17
USP41Q3LFD5 RNU6-383P-201ENST00000410864 94 ntBASIC1.5□□□□□ -2.17
USP41Q3LFD5 RNU6-651P-201ENST00000411040 105 ntBASIC1.5□□□□□ -2.17
USP41Q3LFD5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.5□□□□□ -2.17
USP41Q3LFD5 MIR4503-201ENST00000582187 83 ntBASIC1.5□□□□□ -2.17
USP41Q3LFD5 MIR4762-201ENST00000585261 75 ntBASIC1.5□□□□□ -2.17
USP41Q3LFD5 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
USP41Q3LFD5 U4.1-201ENST00000620349 87 ntBASIC1.5□□□□□ -2.17
USP41Q3LFD5 MIR367-201ENST00000362299 68 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 SNORD33-201ENST00000362761 85 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 RNU6-199P-201ENST00000362954 107 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 RNU6-674P-201ENST00000363831 107 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms