Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SNORD123-201ENST00000459473 70 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 RNU7-116P-201ENST00000516940 62 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 Y_RNA.714-201ENST00000517065 90 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 AC040926.1-201ENST00000530195 238 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 AC127455.1-201ENST00000565496 145 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 AC006157.1-201ENST00000611750 366 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 MIR6504-201ENST00000613520 61 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 MIR6767-201ENST00000637302 66 ntBASIC0.68□□□□□ -2.3
RFX4Q33E94 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
RFX4Q33E94 MIR103A2-201ENST00000362154 78 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 RNU6-1209P-201ENST00000363655 107 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 Y_RNA.796-201ENST00000364268 102 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 Y_RNA.799-201ENST00000364992 102 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 Y_RNA.471-201ENST00000384312 102 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 MIR200A-201ENST00000384875 90 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 SNORD28B-201ENST00000390993 75 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 MIR942-201ENST00000401111 86 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 MIR1276-201ENST00000408707 83 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 MIR1278-201ENST00000408753 81 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 HMGN2P32-201ENST00000444648 269 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 AC136628.3-201ENST00000521868 290 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 AC136443.5-201ENST00000603741 370 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 AL080274.1-201ENST00000605565 220 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 Y_RNA.804-201ENST00000615262 101 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 MIR8070-201ENST00000616510 88 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 MIR548AY-201ENST00000617669 107 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 AL138825.1-201ENST00000618587 192 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 uc_338.22-201ENST00000622722 187 ntBASIC0.67□□□□□ -2.3
RFX4Q33E94 RNU4-80P-201ENST00000363200 141 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 Y_RNA.112-201ENST00000363250 102 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 RNU6-801P-201ENST00000364087 105 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 Y_RNA.330-201ENST00000365230 109 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 MIR1302-7-201ENST00000408841 72 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.66□□□□□ -2.3
RFX4Q33E94 U8.20-201ENST00000459445 131 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 RPL23AP54-201ENST00000495129 419 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 RNU6-1046P-201ENST00000516538 107 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 RNU7-43P-201ENST00000516554 64 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.66□□□□□ -2.3
RFX4Q33E94 AC023827.1-201ENST00000569247 97 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 AC131055.1-201ENST00000584626 316 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 AL133255.1-201ENST00000606374 441 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 AC108706.1-201ENST00000611053 297 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 SEPT14P17-201ENST00000617978 177 ntBASIC0.66□□□□□ -2.3
RFX4Q33E94 MIR373-201ENST00000362273 69 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 MIR96-201ENST00000362288 78 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 Y_RNA.148-201ENST00000363557 117 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 Y_RNA.191-201ENST00000363972 113 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 Y_RNA.383-201ENST00000383855 97 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 RNU6-21P-201ENST00000384710 107 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 RNU6-308P-201ENST00000390957 107 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 RPS3AP1-201ENST00000413190 320 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 AC024067.1-201ENST00000426199 223 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 RNU7-141P-201ENST00000459304 62 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
RFX4Q33E94 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 MIR548AR-201ENST00000582191 57 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 AC134026.1-201ENST00000623249 2239 ntBASIC0.65□□□□□ -2.31
RFX4Q33E94 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
RFX4Q33E94 Y_RNA.31-201ENST00000362574 102 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 SNORD14E-201ENST00000364009 85 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 RNU1-93P-201ENST00000364704 169 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 Y_RNA.395-201ENST00000383945 109 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 Y_RNA.418-201ENST00000384029 102 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 Y_RNA.419-201ENST00000384041 102 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 RNU6-102P-201ENST00000384485 104 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 SNORA26.5-201ENST00000391215 123 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 MIR1302-11-201ENST00000408051 138 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 MIR1302-9-201ENST00000408365 138 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 MIR1302-10-201ENST00000408734 138 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
RFX4Q33E94 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.64□□□□□ -2.31
RFX4Q33E94 RNU6-475P-201ENST00000516073 104 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 LARP7P1-201ENST00000605576 316 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 MIR1302-2-201ENST00000607096 138 ntBASIC0.64□□□□□ -2.31
RFX4Q33E94 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.64□□□□□ -2.31
RFX4Q33E94 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.64□□□□□ -2.31
RFX4Q33E94 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RFX4Q33E94 MIR369-201ENST00000362155 70 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 RNA5SP48-201ENST00000363969 126 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 RNU4-50P-201ENST00000364361 141 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 SNORD42.2-201ENST00000365570 69 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 SNORA72.4-201ENST00000384174 132 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 MIR499A-201ENST00000384903 122 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 MIR570-201ENST00000384917 97 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 SNORD72-201ENST00000390994 80 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 Y_RNA.645-201ENST00000391229 102 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 AL603910.2-201ENST00000407268 136 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 SNORA36B-201ENST00000410438 131 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 AL035398.1-201ENST00000430869 322 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 POLR2KP2-201ENST00000438155 177 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 MTND4P19-201ENST00000446659 478 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 AL392103.1-201ENST00000447000 198 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 1178.7 ms