Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC008507.4-201ENST00000585464 127 ntBASIC2.45□□□□□ -2.02
SSRP1Q08945 AC104465.1-201ENST00000611365 139 ntBASIC2.45□□□□□ -2.02
SSRP1Q08945 Pinc.1-201ENST00000616452 154 ntBASIC2.45□□□□□ -2.02
SSRP1Q08945 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSRP1Q08945 SNORA80E-201ENST00000384744 137 ntBASIC2.44□□□□□ -2.02
SSRP1Q08945 RNU6-1031P-201ENST00000384773 107 ntBASIC2.44□□□□□ -2.02
SSRP1Q08945 RNU6-239P-201ENST00000390990 99 ntBASIC2.44□□□□□ -2.02
SSRP1Q08945 RNA5SP425-201ENST00000410336 112 ntBASIC2.44□□□□□ -2.02
SSRP1Q08945 RNU7-34P-201ENST00000459394 64 ntBASIC2.44□□□□□ -2.02
SSRP1Q08945 RNA5SP57-201ENST00000459463 123 ntBASIC2.44□□□□□ -2.02
SSRP1Q08945 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.44□□□□□ -2.02
SSRP1Q08945 SNORA31.17-201ENST00000516953 127 ntBASIC2.44□□□□□ -2.02
SSRP1Q08945 MIR1273D-201ENST00000577266 86 ntBASIC2.44□□□□□ -2.02
SSRP1Q08945 MIR7843-201ENST00000622274 79 ntBASIC2.44□□□□□ -2.02
SSRP1Q08945 MIR203B-201ENST00000636080 86 ntBASIC2.44□□□□□ -2.02
SSRP1Q08945 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSRP1Q08945 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSRP1Q08945 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.43□□□□□ -2.02
SSRP1Q08945 SNORA26-201ENST00000391286 122 ntBASIC2.43□□□□□ -2.02
SSRP1Q08945 MRPS17P9-201ENST00000511924 393 ntBASIC2.43□□□□□ -2.02
SSRP1Q08945 RNU6-197P-201ENST00000516680 100 ntBASIC2.43□□□□□ -2.02
SSRP1Q08945 AL160236.1-201ENST00000556317 195 ntBASIC2.43□□□□□ -2.02
SSRP1Q08945 MIR3144-201ENST00000579460 79 ntBASIC2.43□□□□□ -2.02
SSRP1Q08945 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.43□□□□□ -2.02
SSRP1Q08945 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.43□□□□□ -2.02
SSRP1Q08945 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SSRP1Q08945 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SSRP1Q08945 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SSRP1Q08945 snoU2-30.1-201ENST00000365012 70 ntBASIC2.42□□□□□ -2.02
SSRP1Q08945 RNA5SP212-201ENST00000391223 107 ntBASIC2.42□□□□□ -2.02
SSRP1Q08945 AL023284.1-201ENST00000403956 276 ntBASIC2.42□□□□□ -2.02
SSRP1Q08945 RN7SKP223-201ENST00000410582 62 ntBASIC2.42□□□□□ -2.02
SSRP1Q08945 AC006461.1-201ENST00000412637 326 ntBASIC2.42□□□□□ -2.02
SSRP1Q08945 RNA5SP153-201ENST00000516498 76 ntBASIC2.42□□□□□ -2.02
SSRP1Q08945 IGLV3-17-201ENST00000519099 244 ntBASIC2.42□□□□□ -2.02
SSRP1Q08945 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SSRP1Q08945 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SSRP1Q08945 RNU6-1084P-201ENST00000362498 107 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 RNU6-804P-201ENST00000384286 107 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 SNORA67.3-201ENST00000384366 140 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 SNORA64-201ENST00000384674 134 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 MIR504-201ENST00000385065 83 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 MIR802-201ENST00000390235 94 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 SNORD72-201ENST00000390994 80 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 Y_RNA.580-201ENST00000391004 95 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 RNU2-70P-201ENST00000410718 179 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 RN7SKP192-201ENST00000411291 327 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 RPL30P13-201ENST00000418873 348 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SSRP1Q08945 RNU6-255P-201ENST00000516957 105 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.41□□□□□ -2.02
SSRP1Q08945 AC121758.2-201ENST00000553271 193 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 AC120024.3-201ENST00000603167 156 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.41□□□□□ -2.02
SSRP1Q08945 AC021753.1-201ENST00000635724 168 ntBASIC2.41□□□□□ -2.02
SSRP1Q08945 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SSRP1Q08945 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SSRP1Q08945 Y_RNA.8-201ENST00000362353 102 ntBASIC2.4□□□□□ -2.03
SSRP1Q08945 SNORD14E-201ENST00000364009 85 ntBASIC2.4□□□□□ -2.03
SSRP1Q08945 SNORD50B-201ENST00000364995 70 ntBASIC2.4□□□□□ -2.03
SSRP1Q08945 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.4□□□□□ -2.03
SSRP1Q08945 snoU13.15-201ENST00000459407 104 ntBASIC2.4□□□□□ -2.03
SSRP1Q08945 CYCTP-201ENST00000504253 315 ntBASIC2.4□□□□□ -2.03
SSRP1Q08945 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.4□□□□□ -2.03
SSRP1Q08945 MIR4287-201ENST00000579398 78 ntBASIC2.4□□□□□ -2.03
SSRP1Q08945 AC097639.2-201ENST00000603159 172 ntBASIC2.4□□□□□ -2.03
SSRP1Q08945 MIR6895-201ENST00000613497 78 ntBASIC2.4□□□□□ -2.03
SSRP1Q08945 MIRLET7C-201ENST00000362160 84 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 Y_RNA.634-201ENST00000364811 113 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 Y_RNA.337-201ENST00000365312 102 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 Y_RNA.486-201ENST00000384398 107 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 MIR144-201ENST00000384886 86 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 RNU6-360P-201ENST00000390944 104 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 CALM2P4-201ENST00000430810 426 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 AL021397.1-201ENST00000451806 248 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 RNU6-237P-201ENST00000515985 71 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 RNU7-121P-201ENST00000516604 62 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 SNORD45.4-201ENST00000516629 73 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 AC021506.2-201ENST00000612354 169 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 AC027279.3-201ENST00000625055 122 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 MIR219B-201ENST00000637023 88 ntBASIC2.39□□□□□ -2.03
SSRP1Q08945 Y_RNA.91-201ENST00000363042 107 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 Y_RNA.170-201ENST00000363746 110 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 RNA5SP160-201ENST00000364866 120 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 RNU6-449P-201ENST00000383914 107 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 Y_RNA.398-201ENST00000383952 99 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 SNORD116-18-201ENST00000383961 92 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 RNU6-442P-201ENST00000383968 104 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 RNU6-424P-201ENST00000384367 105 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 RNU6-163P-201ENST00000384396 106 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 AL603908.1-201ENST00000406098 201 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 AC244636.1-201ENST00000421152 228 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 HMGN2P32-201ENST00000444648 269 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.38□□□□□ -2.03
SSRP1Q08945 AC025033.1-201ENST00000463883 194 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 RNA5SP168-201ENST00000516642 112 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 RNU1-40P-201ENST00000516816 164 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 RNU1-97P-201ENST00000516872 164 ntBASIC2.38□□□□□ -2.03
SSRP1Q08945 RNU6-365P-201ENST00000517113 106 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms