Protein–RNA interactions for Protein: Q03395

ROM1, Rod outer segment membrane protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1Q03395 MIR624-201ENST00000385217 97 ntBASIC2.2□□□□□ -2.06
ROM1Q03395 RNA5SP181-201ENST00000410246 98 ntBASIC2.2□□□□□ -2.06
ROM1Q03395 HMGN2P32-201ENST00000444648 269 ntBASIC2.2□□□□□ -2.06
ROM1Q03395 RNA5SP168-201ENST00000516642 112 ntBASIC2.2□□□□□ -2.06
ROM1Q03395 MIR4709-201ENST00000577272 72 ntBASIC2.2□□□□□ -2.06
ROM1Q03395 MIR3200-201ENST00000580767 85 ntBASIC2.2□□□□□ -2.06
ROM1Q03395 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ROM1Q03395 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ROM1Q03395 Y_RNA.52-201ENST00000362760 96 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 SNORD46.1-201ENST00000364139 104 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 Y_RNA.218-201ENST00000364218 104 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 RNU6-22P-201ENST00000384355 107 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 SNORD23.1-201ENST00000408212 104 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.19□□□□□ -2.06
ROM1Q03395 AF228730.3-201ENST00000436691 102 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 snoU13.27-201ENST00000459278 104 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 RPL12P50-201ENST00000603116 116 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 MIR92B-201ENST00000607575 96 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 U7.2-201ENST00000607576 63 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 AL365222.1-201ENST00000614661 98 ntBASIC2.19□□□□□ -2.06
ROM1Q03395 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
ROM1Q03395 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
ROM1Q03395 Y_RNA.294-201ENST00000364916 102 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 SNORA9-201ENST00000384215 133 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 MIR27B-201ENST00000385129 97 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 SNORD77.3-201ENST00000391113 65 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 RNA5SP481-201ENST00000516814 122 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 RNU6-1234P-201ENST00000516877 103 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 SNORA31.17-201ENST00000516953 127 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 RNU2-60P-201ENST00000517290 128 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.18□□□□□ -2.06
ROM1Q03395 AC021506.2-201ENST00000612354 169 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 AC015726.2-201ENST00000620112 122 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 U4.3-201ENST00000621047 82 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 FO624990.1-201ENST00000636373 85 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.18□□□□□ -2.06
ROM1Q03395 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ROM1Q03395 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.17□□□□□ -2.06
ROM1Q03395 RNA5SP276-201ENST00000362580 94 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 Y_RNA.120-201ENST00000363304 110 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 MIR539-201ENST00000365690 78 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 RNU6-1292P-201ENST00000383856 107 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 Y_RNA.547-201ENST00000384654 119 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 MIR524-201ENST00000385242 87 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.17□□□□□ -2.06
ROM1Q03395 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.17□□□□□ -2.06
ROM1Q03395 RN7SKP132-201ENST00000516001 208 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 RNU7-12P-201ENST00000516030 62 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 RNU6-62P-201ENST00000516526 102 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 AL049779.4-201ENST00000604500 156 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 AC027279.3-201ENST00000625055 122 ntBASIC2.17□□□□□ -2.06
ROM1Q03395 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ROM1Q03395 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.17□□□□□ -2.06
ROM1Q03395 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ROM1Q03395 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ROM1Q03395 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
ROM1Q03395 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ROM1Q03395 Y_RNA.71-201ENST00000362892 104 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 SNORA67.1-201ENST00000364749 141 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 MIR891A-201ENST00000401237 79 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 RNU2-51P-201ENST00000410708 197 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.16□□□□□ -2.06
ROM1Q03395 SNORD109B-201ENST00000458961 67 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 SNORD109A-201ENST00000459128 67 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 RNA5SP57-201ENST00000459463 123 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 AC099513.1-201ENST00000490423 301 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 RNA5SP402-201ENST00000517148 110 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 AC067747.1-201ENST00000608026 250 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 AL137790.1-201ENST00000634283 177 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 MIR376A2-201ENST00000636782 80 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.16□□□□□ -2.06
ROM1Q03395 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
ROM1Q03395 MTND5P32-201ENST00000560711 1802 ntBASIC2.15□□□□□ -2.06
ROM1Q03395 RNU6-508P-201ENST00000363231 103 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 SNORD115-28-201ENST00000363931 81 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 RNU1-138P-201ENST00000384093 164 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 RNU6-1081P-201ENST00000384537 107 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 RNU6-1154P-201ENST00000391001 104 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 SUMO1P4-201ENST00000429430 302 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 AC093850.1-201ENST00000454121 251 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.15□□□□□ -2.07
ROM1Q03395 RNU6-479P-201ENST00000516348 105 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 Y_RNA.690-201ENST00000516603 95 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 AC016717.2-201ENST00000609089 5141 ntBASIC2.15□□□□□ -2.07
ROM1Q03395 RNU6-833P-201ENST00000363486 107 ntBASIC2.14□□□□□ -2.07
ROM1Q03395 Y_RNA.261-201ENST00000364631 102 ntBASIC2.14□□□□□ -2.07
ROM1Q03395 SNORD18B-201ENST00000365659 72 ntBASIC2.14□□□□□ -2.07
ROM1Q03395 SNORD38C-201ENST00000384381 69 ntBASIC2.14□□□□□ -2.07
ROM1Q03395 SNORA22C-201ENST00000384614 134 ntBASIC2.14□□□□□ -2.07
ROM1Q03395 AL445646.1-201ENST00000431784 216 ntBASIC2.14□□□□□ -2.07
ROM1Q03395 RNU5E-3P-201ENST00000515913 68 ntBASIC2.14□□□□□ -2.07
ROM1Q03395 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
ROM1Q03395 MIR548AI-201ENST00000579940 88 ntBASIC2.14□□□□□ -2.07
ROM1Q03395 AC134878.1-201ENST00000619901 243 ntBASIC2.14□□□□□ -2.07
ROM1Q03395 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms