Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 RNU6-155P-201ENST00000516347 100 ntBASIC-0.01□□□□□ -2.41
HOXC5Q00444 SNORA18.4-201ENST00000516440 124 ntBASIC-0.01□□□□□ -2.41
HOXC5Q00444 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.01□□□□□ -2.41
HOXC5Q00444 MIR2355-201ENST00000517199 87 ntBASIC-0.01□□□□□ -2.41
HOXC5Q00444 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.01□□□□□ -2.41
HOXC5Q00444 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.01□□□□□ -2.41
HOXC5Q00444 AC008507.4-201ENST00000585464 127 ntBASIC-0.01□□□□□ -2.41
HOXC5Q00444 AP000753.3-201ENST00000604083 169 ntBASIC-0.01□□□□□ -2.41
HOXC5Q00444 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.01□□□□□ -2.41
HOXC5Q00444 uc_338.4-201ENST00000616635 176 ntBASIC-0.01□□□□□ -2.41
HOXC5Q00444 AC092794.2-201ENST00000620933 563 ntBASIC-0.01□□□□□ -2.41
HOXC5Q00444 MIR4315-1-201ENST00000636800 73 ntBASIC-0.01□□□□□ -2.41
HOXC5Q00444 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.01□□□□□ -2.41
HOXC5Q00444 MIR4315-2-201ENST00000640925 73 ntBASIC-0.01□□□□□ -2.41
HOXC5Q00444 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.01□□□□□ -2.41
HOXC5Q00444 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 RNY4P14-201ENST00000363656 96 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 SNORA24-201ENST00000384096 131 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 RNU6-20P-201ENST00000384106 107 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 SNORD72-201ENST00000390994 80 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 MIR938-201ENST00000401216 83 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 AL590004.1-201ENST00000405321 300 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 MIR548F5-201ENST00000408421 86 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 AF228730.4-201ENST00000421457 183 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 MTND4P28-201ENST00000426217 387 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 FCF1P4-201ENST00000448326 183 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 RNU7-62P-201ENST00000458856 62 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 RNU7-102P-201ENST00000458948 62 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 RPL17P19-201ENST00000489069 552 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 RNU6-314P-201ENST00000516574 104 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 EIF1P4-201ENST00000572664 335 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 AC087685.1-201ENST00000587507 141 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 AC005176.2-201ENST00000596933 147 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.02□□□□□ -2.41
HOXC5Q00444 SNORA36.1-201ENST00000363424 132 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 SNORD114-9-201ENST00000364370 72 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 RNU4-75P-201ENST00000364621 146 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 RNU6-99P-201ENST00000364721 107 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 SNORA75.6-201ENST00000391318 127 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 RNA5SP118-201ENST00000410385 109 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 RNU6-855P-201ENST00000410395 104 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.03□□□□□ -2.41
HOXC5Q00444 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.03□□□□□ -2.41
HOXC5Q00444 MIR2053-201ENST00000459295 91 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 RNU6-120P-201ENST00000516077 103 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 MIR3678-201ENST00000578455 94 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 MIR5188-201ENST00000583467 113 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 POLR3GP1-201ENST00000594073 261 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 AC006441.5-201ENST00000612680 209 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 AC015540.1-201ENST00000615828 501 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 AC010332.2-201ENST00000613083 1904 ntBASIC-0.03□□□□□ -2.41
HOXC5Q00444 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
HOXC5Q00444 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 RNY3P4-201ENST00000384428 101 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 MIR181A1-201ENST00000385026 110 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 RNU6-847P-201ENST00000411115 108 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.04□□□□□ -2.42
HOXC5Q00444 MCFD2P1-201ENST00000417812 300 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.04□□□□□ -2.42
HOXC5Q00444 AC091951.2-201ENST00000500762 203 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 RNU7-115P-201ENST00000516433 55 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.04□□□□□ -2.42
HOXC5Q00444 AC024405.2-202ENST00000532731 184 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.04□□□□□ -2.42
HOXC5Q00444 AC112693.2-201ENST00000556538 232 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 AC127455.1-201ENST00000565496 145 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 RPL23AP91-201ENST00000569211 455 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 SNORD92-201ENST00000585078 85 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 AP003357.1-201ENST00000604497 148 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 AC022441.3-201ENST00000605737 136 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 AC103591.3-201ENST00000608684 209 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.04□□□□□ -2.42
HOXC5Q00444 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 AC007742.2-201ENST00000618226 398 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 MIR6755-201ENST00000619993 66 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 AC010487.4-201ENST00000637027 61 ntBASIC-0.04□□□□□ -2.42
HOXC5Q00444 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.04□□□□□ -2.42
HOXC5Q00444 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 RNU6-626P-201ENST00000363354 107 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 MIR125B2-201ENST00000385128 89 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 SNORA69.1-201ENST00000390904 137 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 MIR1278-201ENST00000408753 81 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 SNORD11-201ENST00000459124 84 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 RPL23AP54-201ENST00000495129 419 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 RNU7-116P-201ENST00000516940 62 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 AC133485.4-201ENST00000561835 220 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 AC104408.1-201ENST00000605241 170 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.05□□□□□ -2.42
HOXC5Q00444 JPX_2.1-201ENST00000614161 69 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms