Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 MIR4658-201ENST00000584344 65 ntBASIC3.32□□□□□ -1.88
MCCD1P59942 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.32□□□□□ -1.88
MCCD1P59942 AC012314.7-201ENST00000619693 93 ntBASIC3.32□□□□□ -1.88
MCCD1P59942 AC073346.2-201ENST00000624724 2058 ntBASIC3.31□□□□□ -1.88
MCCD1P59942 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.31□□□□□ -1.88
MCCD1P59942 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
MCCD1P59942 Y_RNA.454-201ENST00000384224 113 ntBASIC3.31□□□□□ -1.88
MCCD1P59942 Y_RNA.544-201ENST00000384650 113 ntBASIC3.31□□□□□ -1.88
MCCD1P59942 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.31□□□□□ -1.88
MCCD1P59942 AC087499.4-201ENST00000448505 178 ntBASIC3.31□□□□□ -1.88
MCCD1P59942 MIR5094-201ENST00000578766 85 ntBASIC3.31□□□□□ -1.88
MCCD1P59942 AC005000.2-201ENST00000605468 310 ntBASIC3.31□□□□□ -1.88
MCCD1P59942 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MCCD1P59942 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
MCCD1P59942 MIR548D2-201ENST00000384955 97 ntBASIC3.3□□□□□ -1.88
MCCD1P59942 RNU2-35P-201ENST00000516446 142 ntBASIC3.3□□□□□ -1.88
MCCD1P59942 AC084364.2-201ENST00000546924 395 ntBASIC3.3□□□□□ -1.88
MCCD1P59942 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.3□□□□□ -1.88
MCCD1P59942 RPL12P50-201ENST00000603116 116 ntBASIC3.3□□□□□ -1.88
MCCD1P59942 U4atac.1-201ENST00000618345 95 ntBASIC3.3□□□□□ -1.88
MCCD1P59942 MIR8057-201ENST00000620957 69 ntBASIC3.3□□□□□ -1.88
MCCD1P59942 AC022513.1-201ENST00000624512 117 ntBASIC3.3□□□□□ -1.88
MCCD1P59942 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
MCCD1P59942 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
MCCD1P59942 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MCCD1P59942 SNORA63D-201ENST00000364359 132 ntBASIC3.29□□□□□ -1.88
MCCD1P59942 BX510359.4-201ENST00000423750 193 ntBASIC3.29□□□□□ -1.88
MCCD1P59942 RPS29P6-201ENST00000438196 145 ntBASIC3.29□□□□□ -1.88
MCCD1P59942 RPL39P25-201ENST00000449384 154 ntBASIC3.29□□□□□ -1.88
MCCD1P59942 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.29□□□□□ -1.88
MCCD1P59942 AC008885.1-201ENST00000514930 301 ntBASIC3.29□□□□□ -1.88
MCCD1P59942 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.29□□□□□ -1.88
MCCD1P59942 MIR3163-201ENST00000581592 73 ntBASIC3.29□□□□□ -1.88
MCCD1P59942 AL513534.2-201ENST00000603836 250 ntBASIC3.29□□□□□ -1.88
MCCD1P59942 AC007318.2-201ENST00000620999 243 ntBASIC3.29□□□□□ -1.88
MCCD1P59942 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.29□□□□□ -1.88
MCCD1P59942 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
MCCD1P59942 MIR302B-201ENST00000362188 73 ntBASIC3.28□□□□□ -1.88
MCCD1P59942 RN7SKP200-201ENST00000410564 320 ntBASIC3.28□□□□□ -1.88
MCCD1P59942 Z92545.1-201ENST00000411782 234 ntBASIC3.28□□□□□ -1.88
MCCD1P59942 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.28□□□□□ -1.88
MCCD1P59942 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
MCCD1P59942 AC007179.3-201ENST00000604976 235 ntBASIC3.28□□□□□ -1.88
MCCD1P59942 SNORA28-201ENST00000606769 126 ntBASIC3.28□□□□□ -1.88
MCCD1P59942 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
MCCD1P59942 AC108206.1-201ENST00000570186 4159 ntBASIC3.28□□□□□ -1.88
MCCD1P59942 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
MCCD1P59942 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MCCD1P59942 SNORA27-201ENST00000384323 126 ntBASIC3.27□□□□□ -1.89
MCCD1P59942 AL627390.1-201ENST00000396055 340 ntBASIC3.27□□□□□ -1.89
MCCD1P59942 RNA5SP344-201ENST00000411081 104 ntBASIC3.27□□□□□ -1.89
MCCD1P59942 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.27□□□□□ -1.89
MCCD1P59942 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.27□□□□□ -1.89
MCCD1P59942 UQCRHP3-201ENST00000451503 251 ntBASIC3.27□□□□□ -1.89
MCCD1P59942 PRSS3P4-201ENST00000453323 162 ntBASIC3.27□□□□□ -1.89
MCCD1P59942 SNORA31.10-201ENST00000516482 106 ntBASIC3.27□□□□□ -1.89
MCCD1P59942 RNU7-181P-201ENST00000517234 74 ntBASIC3.27□□□□□ -1.89
MCCD1P59942 MIR3126-201ENST00000577443 74 ntBASIC3.27□□□□□ -1.89
MCCD1P59942 MIR3651-201ENST00000630427 90 ntBASIC3.27□□□□□ -1.89
MCCD1P59942 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.27□□□□□ -1.89
MCCD1P59942 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
MCCD1P59942 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MCCD1P59942 MIR22-201ENST00000362190 85 ntBASIC3.26□□□□□ -1.89
MCCD1P59942 Y_RNA.494-201ENST00000384432 111 ntBASIC3.26□□□□□ -1.89
MCCD1P59942 MIR23B-201ENST00000384832 97 ntBASIC3.26□□□□□ -1.89
MCCD1P59942 SNORD67-201ENST00000390833 111 ntBASIC3.26□□□□□ -1.89
MCCD1P59942 RNU11-3P-201ENST00000391111 133 ntBASIC3.26□□□□□ -1.89
MCCD1P59942 MIR1302-4-201ENST00000408701 150 ntBASIC3.26□□□□□ -1.89
MCCD1P59942 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.26□□□□□ -1.89
MCCD1P59942 AC078899.2-201ENST00000595282 212 ntBASIC3.26□□□□□ -1.89
MCCD1P59942 AC069114.2-201ENST00000604699 304 ntBASIC3.26□□□□□ -1.89
MCCD1P59942 AL161431.1-201ENST00000618966 4205 ntBASIC3.26□□□□□ -1.89
MCCD1P59942 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
MCCD1P59942 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.26□□□□□ -1.89
MCCD1P59942 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MCCD1P59942 RNU1-58P-201ENST00000362413 163 ntBASIC3.25□□□□□ -1.89
MCCD1P59942 RNA5SP374-201ENST00000362939 125 ntBASIC3.25□□□□□ -1.89
MCCD1P59942 MIR488-201ENST00000365739 83 ntBASIC3.25□□□□□ -1.89
MCCD1P59942 RNY1P7-201ENST00000384743 110 ntBASIC3.25□□□□□ -1.89
MCCD1P59942 AC015922.2-201ENST00000435593 184 ntBASIC3.25□□□□□ -1.89
MCCD1P59942 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.25□□□□□ -1.89
MCCD1P59942 BX510359.1-201ENST00000456973 237 ntBASIC3.25□□□□□ -1.89
MCCD1P59942 RN7SL499P-201ENST00000481141 276 ntBASIC3.25□□□□□ -1.89
MCCD1P59942 AC005786.1-201ENST00000588553 154 ntBASIC3.25□□□□□ -1.89
MCCD1P59942 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MCCD1P59942 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.24□□□□□ -1.89
MCCD1P59942 MIR208A-201ENST00000362287 71 ntBASIC3.24□□□□□ -1.89
MCCD1P59942 RNU6-1019P-201ENST00000364424 107 ntBASIC3.24□□□□□ -1.89
MCCD1P59942 RNU6-424P-201ENST00000384367 105 ntBASIC3.24□□□□□ -1.89
MCCD1P59942 MIR597-201ENST00000384968 97 ntBASIC3.24□□□□□ -1.89
MCCD1P59942 MIR524-201ENST00000385242 87 ntBASIC3.24□□□□□ -1.89
MCCD1P59942 SNORA26.2-201ENST00000390922 122 ntBASIC3.24□□□□□ -1.89
MCCD1P59942 U8.16-201ENST00000391279 133 ntBASIC3.24□□□□□ -1.89
MCCD1P59942 RNA5SP274-201ENST00000410484 108 ntBASIC3.24□□□□□ -1.89
MCCD1P59942 HSPE1P9-201ENST00000440046 311 ntBASIC3.24□□□□□ -1.89
MCCD1P59942 S100A11P2-201ENST00000467589 312 ntBASIC3.24□□□□□ -1.89
MCCD1P59942 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.24□□□□□ -1.89
MCCD1P59942 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
MCCD1P59942 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MCCD1P59942 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms