Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 Y_RNA.569-201ENST00000384749 103 ntBASIC1.54□□□□□ -2.16
RHBDL3P58872 Y_RNA.602-201ENST00000410535 92 ntBASIC1.54□□□□□ -2.16
RHBDL3P58872 AC245047.7-201ENST00000440265 293 ntBASIC1.54□□□□□ -2.16
RHBDL3P58872 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.54□□□□□ -2.16
RHBDL3P58872 RNU6-496P-201ENST00000516145 99 ntBASIC1.54□□□□□ -2.16
RHBDL3P58872 AC068338.1-201ENST00000565567 176 ntBASIC1.54□□□□□ -2.16
RHBDL3P58872 BX284668.6-201ENST00000606899 438 ntBASIC1.54□□□□□ -2.16
RHBDL3P58872 Y_RNA.116-201ENST00000363292 103 ntBASIC1.53□□□□□ -2.16
RHBDL3P58872 RNU6-969P-201ENST00000383900 105 ntBASIC1.53□□□□□ -2.16
RHBDL3P58872 SNORD12-201ENST00000391002 90 ntBASIC1.53□□□□□ -2.16
RHBDL3P58872 Y_RNA.581-201ENST00000391017 97 ntBASIC1.53□□□□□ -2.16
RHBDL3P58872 SNORA53-201ENST00000391141 249 ntBASIC1.53□□□□□ -2.16
RHBDL3P58872 RNU6-437P-201ENST00000459408 95 ntBASIC1.53□□□□□ -2.16
RHBDL3P58872 RNA5SP102-201ENST00000516865 106 ntBASIC1.53□□□□□ -2.16
RHBDL3P58872 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.53□□□□□ -2.16
RHBDL3P58872 MIR7111-201ENST00000619751 72 ntBASIC1.53□□□□□ -2.16
RHBDL3P58872 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.53□□□□□ -2.16
RHBDL3P58872 RNU6-674P-201ENST00000363831 107 ntBASIC1.52□□□□□ -2.17
RHBDL3P58872 RNU6-899P-201ENST00000363947 107 ntBASIC1.52□□□□□ -2.17
RHBDL3P58872 Y_RNA.796-201ENST00000364268 102 ntBASIC1.52□□□□□ -2.17
RHBDL3P58872 Y_RNA.799-201ENST00000364992 102 ntBASIC1.52□□□□□ -2.17
RHBDL3P58872 RNU6-514P-201ENST00000384208 107 ntBASIC1.52□□□□□ -2.17
RHBDL3P58872 Y_RNA.508-201ENST00000384502 114 ntBASIC1.52□□□□□ -2.17
RHBDL3P58872 SNORA36B-201ENST00000410438 131 ntBASIC1.52□□□□□ -2.17
RHBDL3P58872 RNU6-191P-201ENST00000516295 94 ntBASIC1.52□□□□□ -2.17
RHBDL3P58872 Y_RNA.138-201ENST00000363462 102 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 RNU6-290P-201ENST00000365212 101 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 SNORD38C-201ENST00000384381 69 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 MIR518E-201ENST00000385252 88 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 MIR758-201ENST00000390227 88 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 RNU7-141P-201ENST00000459304 62 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 SNORA74.3-201ENST00000517108 154 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 MIR3171-201ENST00000584270 74 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 MIR6078-201ENST00000611069 100 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 AC027335.2-201ENST00000624030 375 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 AC091895.1-201ENST00000624494 256 ntBASIC1.51□□□□□ -2.17
RHBDL3P58872 RNU6-770P-201ENST00000363929 105 ntBASIC1.5□□□□□ -2.17
RHBDL3P58872 RNU6-144P-201ENST00000383951 107 ntBASIC1.5□□□□□ -2.17
RHBDL3P58872 RNU6-442P-201ENST00000383968 104 ntBASIC1.5□□□□□ -2.17
RHBDL3P58872 RNU6-910P-201ENST00000390844 107 ntBASIC1.5□□□□□ -2.17
RHBDL3P58872 HSPE1P25-201ENST00000455484 251 ntBASIC1.5□□□□□ -2.17
RHBDL3P58872 AL512605.2-201ENST00000592972 256 ntBASIC1.5□□□□□ -2.17
RHBDL3P58872 AC044792.1-201ENST00000593294 196 ntBASIC1.5□□□□□ -2.17
RHBDL3P58872 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.5□□□□□ -2.17
RHBDL3P58872 MIR96-201ENST00000362288 78 ntBASIC1.49□□□□□ -2.17
RHBDL3P58872 SNORD50B-201ENST00000364995 70 ntBASIC1.49□□□□□ -2.17
RHBDL3P58872 Y_RNA.394-201ENST00000383942 103 ntBASIC1.49□□□□□ -2.17
RHBDL3P58872 SNORA80D-201ENST00000384488 135 ntBASIC1.49□□□□□ -2.17
RHBDL3P58872 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.49□□□□□ -2.17
RHBDL3P58872 AC015922.2-201ENST00000435593 184 ntBASIC1.49□□□□□ -2.17
RHBDL3P58872 AC023449.1-201ENST00000454464 154 ntBASIC1.49□□□□□ -2.17
RHBDL3P58872 AC048334.1-201ENST00000477975 159 ntBASIC1.49□□□□□ -2.17
RHBDL3P58872 AC010655.3-201ENST00000478818 450 ntBASIC1.49□□□□□ -2.17
RHBDL3P58872 SNORD116-28-201ENST00000516123 91 ntBASIC1.49□□□□□ -2.17
RHBDL3P58872 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
RHBDL3P58872 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.49□□□□□ -2.17
RHBDL3P58872 RNU6-1209P-201ENST00000363655 107 ntBASIC1.48□□□□□ -2.17
RHBDL3P58872 Y_RNA.269-201ENST00000364685 89 ntBASIC1.48□□□□□ -2.17
RHBDL3P58872 Y_RNA.418-201ENST00000384029 102 ntBASIC1.48□□□□□ -2.17
RHBDL3P58872 MIR516B2-201ENST00000385190 85 ntBASIC1.48□□□□□ -2.17
RHBDL3P58872 AL133373.1-201ENST00000497098 94 ntBASIC1.48□□□□□ -2.17
RHBDL3P58872 RNU7-43P-201ENST00000516554 64 ntBASIC1.48□□□□□ -2.17
RHBDL3P58872 RNU2-31P-201ENST00000516954 155 ntBASIC1.48□□□□□ -2.17
RHBDL3P58872 AC090142.3-201ENST00000519012 385 ntBASIC1.48□□□□□ -2.17
RHBDL3P58872 AC131281.1-201ENST00000522984 164 ntBASIC1.48□□□□□ -2.17
RHBDL3P58872 AC113195.1-201ENST00000579952 141 ntBASIC1.48□□□□□ -2.17
RHBDL3P58872 SNORA25.1-201ENST00000362326 128 ntBASIC1.47□□□□□ -2.17
RHBDL3P58872 RNU6-801P-201ENST00000364087 105 ntBASIC1.47□□□□□ -2.17
RHBDL3P58872 RNU6-326P-201ENST00000365480 107 ntBASIC1.47□□□□□ -2.17
RHBDL3P58872 RNU6-102P-201ENST00000384485 104 ntBASIC1.47□□□□□ -2.17
RHBDL3P58872 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
RHBDL3P58872 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.47□□□□□ -2.17
RHBDL3P58872 RNY3P15-201ENST00000516297 97 ntBASIC1.47□□□□□ -2.17
RHBDL3P58872 RNA5SP404-201ENST00000517118 132 ntBASIC1.47□□□□□ -2.17
RHBDL3P58872 AC020661.2-201ENST00000560114 134 ntBASIC1.47□□□□□ -2.17
RHBDL3P58872 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.47□□□□□ -2.17
RHBDL3P58872 AL356055.1-201ENST00000602528 446 ntBASIC1.47□□□□□ -2.17
RHBDL3P58872 RNU6-1205P-201ENST00000363625 106 ntBASIC1.46□□□□□ -2.18
RHBDL3P58872 RNU1-124P-201ENST00000363861 145 ntBASIC1.46□□□□□ -2.18
RHBDL3P58872 MIR520C-201ENST00000385005 87 ntBASIC1.46□□□□□ -2.18
RHBDL3P58872 AC245047.8-201ENST00000456455 284 ntBASIC1.46□□□□□ -2.18
RHBDL3P58872 RNU6-764P-201ENST00000516396 105 ntBASIC1.46□□□□□ -2.18
RHBDL3P58872 MIR4680-201ENST00000580906 66 ntBASIC1.46□□□□□ -2.18
RHBDL3P58872 MIR4452-201ENST00000583004 71 ntBASIC1.46□□□□□ -2.18
RHBDL3P58872 AC005357.1-201ENST00000588399 301 ntBASIC1.46□□□□□ -2.18
RHBDL3P58872 AC136443.5-201ENST00000603741 370 ntBASIC1.46□□□□□ -2.18
RHBDL3P58872 RNA5SP48-201ENST00000363969 126 ntBASIC1.45□□□□□ -2.18
RHBDL3P58872 Y_RNA.191-201ENST00000363972 113 ntBASIC1.45□□□□□ -2.18
RHBDL3P58872 Y_RNA.224-201ENST00000364308 111 ntBASIC1.45□□□□□ -2.18
RHBDL3P58872 SNORD114-22-201ENST00000365423 72 ntBASIC1.45□□□□□ -2.18
RHBDL3P58872 RNU6-639P-201ENST00000384074 107 ntBASIC1.45□□□□□ -2.18
RHBDL3P58872 Y_RNA.527-201ENST00000384573 102 ntBASIC1.45□□□□□ -2.18
RHBDL3P58872 AL591704.2-201ENST00000421658 181 ntBASIC1.45□□□□□ -2.18
RHBDL3P58872 MTCO1P5-201ENST00000433573 344 ntBASIC1.45□□□□□ -2.18
RHBDL3P58872 Y_RNA.701-201ENST00000516812 110 ntBASIC1.45□□□□□ -2.18
RHBDL3P58872 Y_RNA.19-201ENST00000362462 99 ntBASIC1.44□□□□□ -2.18
RHBDL3P58872 Y_RNA.210-201ENST00000364161 110 ntBASIC1.44□□□□□ -2.18
RHBDL3P58872 MTCO2P33-201ENST00000402100 465 ntBASIC1.44□□□□□ -2.18
RHBDL3P58872 AC063976.4-201ENST00000421971 163 ntBASIC1.44□□□□□ -2.18
RHBDL3P58872 RPL23AP91-201ENST00000569211 455 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms