Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 Y_RNA.474-201ENST00000384341 102 ntBASIC0.44□□□□□ -2.34
VSX2P58304 RNU6-192P-201ENST00000391253 100 ntBASIC0.44□□□□□ -2.34
VSX2P58304 AL590004.1-201ENST00000405321 300 ntBASIC0.44□□□□□ -2.34
VSX2P58304 FCF1P9-201ENST00000412546 282 ntBASIC0.44□□□□□ -2.34
VSX2P58304 AF228730.4-201ENST00000421457 183 ntBASIC0.44□□□□□ -2.34
VSX2P58304 PRDX4P1-201ENST00000507189 574 ntBASIC0.44□□□□□ -2.34
VSX2P58304 RNA5SP121-201ENST00000516537 101 ntBASIC0.44□□□□□ -2.34
VSX2P58304 MIR1273G-201ENST00000577677 100 ntBASIC0.44□□□□□ -2.34
VSX2P58304 POLR3GP1-201ENST00000594073 261 ntBASIC0.44□□□□□ -2.34
VSX2P58304 RBM11P1-201ENST00000604951 799 ntBASIC0.44□□□□□ -2.34
VSX2P58304 AC008133.2-201ENST00000624540 351 ntBASIC0.44□□□□□ -2.34
VSX2P58304 U6.92-201ENST00000636464 89 ntBASIC0.44□□□□□ -2.34
VSX2P58304 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
VSX2P58304 RNU6-369P-201ENST00000362515 102 ntBASIC0.43□□□□□ -2.34
VSX2P58304 U8.7-201ENST00000364940 136 ntBASIC0.43□□□□□ -2.34
VSX2P58304 Y_RNA.314-201ENST00000365114 102 ntBASIC0.43□□□□□ -2.34
VSX2P58304 RNU6-1175P-201ENST00000365200 107 ntBASIC0.43□□□□□ -2.34
VSX2P58304 RNU6-1323P-201ENST00000384025 107 ntBASIC0.43□□□□□ -2.34
VSX2P58304 SNORA2B-201ENST00000384583 137 ntBASIC0.43□□□□□ -2.34
VSX2P58304 MT-TL1-201ENST00000386347 75 ntBASIC0.43□□□□□ -2.34
VSX2P58304 SNORD78.2-201ENST00000391076 69 ntBASIC0.43□□□□□ -2.34
VSX2P58304 MIR1278-201ENST00000408753 81 ntBASIC0.43□□□□□ -2.34
VSX2P58304 RNU6-855P-201ENST00000410395 104 ntBASIC0.43□□□□□ -2.34
VSX2P58304 AC005534.2-201ENST00000431047 433 ntBASIC0.43□□□□□ -2.34
VSX2P58304 SNRPGP14-201ENST00000435400 219 ntBASIC0.43□□□□□ -2.34
VSX2P58304 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.43□□□□□ -2.34
VSX2P58304 Y_RNA.635-201ENST00000459041 101 ntBASIC0.43□□□□□ -2.34
VSX2P58304 snoU13.21-201ENST00000459368 105 ntBASIC0.43□□□□□ -2.34
VSX2P58304 HMGN1P10-201ENST00000474557 553 ntBASIC0.43□□□□□ -2.34
VSX2P58304 NDUFA4P2-201ENST00000489989 244 ntBASIC0.43□□□□□ -2.34
VSX2P58304 AC091951.2-201ENST00000500762 203 ntBASIC0.43□□□□□ -2.34
VSX2P58304 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.43□□□□□ -2.34
VSX2P58304 RNU11-2P-201ENST00000516898 142 ntBASIC0.43□□□□□ -2.34
VSX2P58304 AC144568.1-201ENST00000520139 137 ntBASIC0.43□□□□□ -2.34
VSX2P58304 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.43□□□□□ -2.34
VSX2P58304 MIR5690-201ENST00000583739 73 ntBASIC0.43□□□□□ -2.34
VSX2P58304 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.43□□□□□ -2.34
VSX2P58304 AC022306.2-201ENST00000617563 647 ntBASIC0.43□□□□□ -2.34
VSX2P58304 U2.1-201ENST00000618978 145 ntBASIC0.43□□□□□ -2.34
VSX2P58304 RNU6-1209P-201ENST00000363655 107 ntBASIC0.42□□□□□ -2.34
VSX2P58304 RNA5SP325-201ENST00000363756 130 ntBASIC0.42□□□□□ -2.34
VSX2P58304 RNA5SP48-201ENST00000363969 126 ntBASIC0.42□□□□□ -2.34
VSX2P58304 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
VSX2P58304 MIR559-201ENST00000385188 96 ntBASIC0.42□□□□□ -2.34
VSX2P58304 MIR1827-201ENST00000408549 66 ntBASIC0.42□□□□□ -2.34
VSX2P58304 RNU6-994P-201ENST00000410507 111 ntBASIC0.42□□□□□ -2.34
VSX2P58304 RNA5SP222-201ENST00000411039 105 ntBASIC0.42□□□□□ -2.34
VSX2P58304 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.42□□□□□ -2.34
VSX2P58304 MTND1P34-201ENST00000438556 671 ntBASIC0.42□□□□□ -2.34
VSX2P58304 FGF7P6-202ENST00000451282 293 ntBASIC0.42□□□□□ -2.34
VSX2P58304 AC010655.3-201ENST00000478818 450 ntBASIC0.42□□□□□ -2.34
VSX2P58304 RNU7-4P-201ENST00000516961 62 ntBASIC0.42□□□□□ -2.34
VSX2P58304 AL355375.2-201ENST00000574825 175 ntBASIC0.42□□□□□ -2.34
VSX2P58304 MIR548AO-201ENST00000579992 96 ntBASIC0.42□□□□□ -2.34
VSX2P58304 MIR4300-201ENST00000581016 96 ntBASIC0.42□□□□□ -2.34
VSX2P58304 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
VSX2P58304 Y_RNA.203-201ENST00000364106 102 ntBASIC0.41□□□□□ -2.34
VSX2P58304 RNU6-268P-201ENST00000364174 107 ntBASIC0.41□□□□□ -2.34
VSX2P58304 Y_RNA.341-201ENST00000365341 102 ntBASIC0.41□□□□□ -2.34
VSX2P58304 SNORD105-201ENST00000386910 85 ntBASIC0.41□□□□□ -2.34
VSX2P58304 MTND1P2-201ENST00000430604 821 ntBASIC0.41□□□□□ -2.34
VSX2P58304 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.41□□□□□ -2.34
VSX2P58304 RNU6-699P-201ENST00000517081 110 ntBASIC0.41□□□□□ -2.34
VSX2P58304 RNU7-181P-201ENST00000517234 74 ntBASIC0.41□□□□□ -2.34
VSX2P58304 AC024405.2-202ENST00000532731 184 ntBASIC0.41□□□□□ -2.34
VSX2P58304 AC093027.1-201ENST00000546698 429 ntBASIC0.41□□□□□ -2.34
VSX2P58304 DEFB117-201ENST00000602356 141 ntBASIC0.41□□□□□ -2.34
VSX2P58304 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
VSX2P58304 MTND4LP32-201ENST00000636111 270 ntBASIC0.41□□□□□ -2.34
VSX2P58304 Y_RNA.166-201ENST00000363730 102 ntBASIC0.4□□□□□ -2.35
VSX2P58304 SNORD14E-201ENST00000364009 85 ntBASIC0.4□□□□□ -2.35
VSX2P58304 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
VSX2P58304 Y_RNA.570-201ENST00000384750 101 ntBASIC0.4□□□□□ -2.35
VSX2P58304 RNU6-1067P-201ENST00000384752 107 ntBASIC0.4□□□□□ -2.35
VSX2P58304 MIR15B-201ENST00000385045 98 ntBASIC0.4□□□□□ -2.35
VSX2P58304 U8.17-201ENST00000391292 132 ntBASIC0.4□□□□□ -2.35
VSX2P58304 RNU6-876P-201ENST00000391295 104 ntBASIC0.4□□□□□ -2.35
VSX2P58304 AC015818.7-201ENST00000428754 109 ntBASIC0.4□□□□□ -2.35
VSX2P58304 AC087499.7-201ENST00000441958 109 ntBASIC0.4□□□□□ -2.35
VSX2P58304 HMGN2P32-201ENST00000444648 269 ntBASIC0.4□□□□□ -2.35
VSX2P58304 RN7SKP295-201ENST00000517264 153 ntBASIC0.4□□□□□ -2.35
VSX2P58304 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
VSX2P58304 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.4□□□□□ -2.35
VSX2P58304 SNORD45.3-201ENST00000363836 72 ntBASIC0.39□□□□□ -2.35
VSX2P58304 Y_RNA.230-201ENST00000364348 109 ntBASIC0.39□□□□□ -2.35
VSX2P58304 SNORA36.2-201ENST00000384004 127 ntBASIC0.39□□□□□ -2.35
VSX2P58304 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
VSX2P58304 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
VSX2P58304 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.39□□□□□ -2.35
VSX2P58304 RNU6-613P-201ENST00000410412 108 ntBASIC0.39□□□□□ -2.35
VSX2P58304 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.39□□□□□ -2.35
VSX2P58304 AC067940.1-201ENST00000458411 300 ntBASIC0.39□□□□□ -2.35
VSX2P58304 AC018659.1-201ENST00000551083 169 ntBASIC0.39□□□□□ -2.35
VSX2P58304 MIR3145-201ENST00000580727 82 ntBASIC0.39□□□□□ -2.35
VSX2P58304 MIR4423-201ENST00000580922 80 ntBASIC0.39□□□□□ -2.35
VSX2P58304 AC104695.3-201ENST00000604052 296 ntBASIC0.39□□□□□ -2.35
VSX2P58304 AP003357.1-201ENST00000604497 148 ntBASIC0.39□□□□□ -2.35
VSX2P58304 Pinc.1-201ENST00000616452 154 ntBASIC0.39□□□□□ -2.35
VSX2P58304 MTND1P7-201ENST00000632801 297 ntBASIC0.39□□□□□ -2.35
VSX2P58304 MIR1-1-201ENST00000362147 71 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms