Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 Y_RNA.618-201ENST00000410949 107 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN20P56880 CYCTP-201ENST00000504253 315 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.5□□□□□ -2.17
CLDN20P56880 MTND1P19-201ENST00000511780 315 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 RNU6-1023P-201ENST00000516137 106 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.5□□□□□ -2.17
CLDN20P56880 MIR4643-201ENST00000577473 78 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 AC015688.6-201ENST00000577737 104 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 MIR3128-201ENST00000581957 66 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 SNORD3E-202ENST00000627253 216 ntBASIC1.5□□□□□ -2.17
CLDN20P56880 ICE2P2-201ENST00000483823 2787 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CLDN20P56880 SNORD27-201ENST00000363981 72 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 MIR526A2-201ENST00000390198 65 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 RNU6-131P-201ENST00000391144 107 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 SNORD58.1-201ENST00000391313 66 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 Y_RNA.638-201ENST00000459374 113 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 AC005908.1-201ENST00000468701 347 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 Y_RNA.673-201ENST00000516306 88 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 MIR4255-201ENST00000579351 72 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 MIR4724-201ENST00000579485 89 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 AC120024.3-201ENST00000603167 156 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 Y_RNA.802-201ENST00000614892 130 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 AC027279.3-201ENST00000625055 122 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 AC068700.1-201ENST00000565862 3754 ntBASIC1.49□□□□□ -2.17
CLDN20P56880 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
CLDN20P56880 RNA5SP432-201ENST00000362480 116 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 RNU6-163P-201ENST00000384396 106 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 MIR513A1-201ENST00000385138 129 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.48□□□□□ -2.17
CLDN20P56880 MLLT10P1-201ENST00000418346 262 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 RNU7-12P-201ENST00000516030 62 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 Y_RNA.680-201ENST00000516441 93 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 RNU6-1007P-201ENST00000516586 107 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.48□□□□□ -2.17
CLDN20P56880 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.48□□□□□ -2.17
CLDN20P56880 CBX3P4-201ENST00000538909 354 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 RPL23AP91-201ENST00000569211 455 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 AC087685.1-201ENST00000587507 141 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 AL442067.1-201ENST00000613261 223 ntBASIC1.48□□□□□ -2.17
CLDN20P56880 MIR302D-201ENST00000362275 68 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 Y_RNA.60-201ENST00000362831 98 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 RNU6-833P-201ENST00000363486 107 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 SNORA20.1-201ENST00000364790 130 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 Y_RNA.304-201ENST00000365011 112 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 SNORA8.3-201ENST00000384679 139 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 RNU6-482P-201ENST00000391068 107 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 RNA5SP496-201ENST00000391240 109 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 MIR891A-201ENST00000401237 79 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 MIR934-201ENST00000401241 83 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 MIR1278-201ENST00000408753 81 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 RNU6-383P-201ENST00000410864 94 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 SUMO2P16-201ENST00000519475 264 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 AC100767.1-201ENST00000528178 123 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.47□□□□□ -2.17
CLDN20P56880 AC006006.1-201ENST00000603082 144 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 MIR8063-201ENST00000621930 81 ntBASIC1.47□□□□□ -2.17
CLDN20P56880 RNU6-1084P-201ENST00000362498 107 ntBASIC1.46□□□□□ -2.18
CLDN20P56880 Y_RNA.76-201ENST00000362931 109 ntBASIC1.46□□□□□ -2.18
CLDN20P56880 RNA5SP259-201ENST00000365541 109 ntBASIC1.46□□□□□ -2.18
CLDN20P56880 RNU6-338P-201ENST00000383888 105 ntBASIC1.46□□□□□ -2.18
CLDN20P56880 Y_RNA.539-201ENST00000384635 107 ntBASIC1.46□□□□□ -2.18
CLDN20P56880 SNORA17.3-201ENST00000391159 129 ntBASIC1.46□□□□□ -2.18
CLDN20P56880 SNORD11-201ENST00000459124 84 ntBASIC1.46□□□□□ -2.18
CLDN20P56880 RNU6-1116P-201ENST00000517269 99 ntBASIC1.46□□□□□ -2.18
CLDN20P56880 MIR4778-201ENST00000577635 80 ntBASIC1.46□□□□□ -2.18
CLDN20P56880 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.46□□□□□ -2.18
CLDN20P56880 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CLDN20P56880 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CLDN20P56880 SNORD33-201ENST00000362761 85 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 RNU6-199P-201ENST00000362954 107 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 Y_RNA.188-201ENST00000363952 111 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 RNU4-10P-201ENST00000364383 140 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 Y_RNA.292-201ENST00000364904 97 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 snoU2-30.1-201ENST00000365012 70 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 Y_RNA.489-201ENST00000384410 101 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 MIR626-201ENST00000385032 94 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 MT-TG-201ENST00000387429 68 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 RN7SKP101-201ENST00000411376 320 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 PIGPP3-201ENST00000425307 415 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 HMGN2P32-201ENST00000444648 269 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 AC023449.1-201ENST00000454464 154 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 NDUFA4P2-201ENST00000489989 244 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 AC114811.1-201ENST00000507207 168 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 SNORD116-28-201ENST00000516123 91 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 SNORD45.4-201ENST00000516629 73 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 MIR4285-201ENST00000581001 85 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 AC011921.3-201ENST00000605540 361 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 AL021707.8-201ENST00000609428 183 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 AL365265.1-201ENST00000621045 234 ntBASIC1.45□□□□□ -2.18
CLDN20P56880 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
CLDN20P56880 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
CLDN20P56880 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CLDN20P56880 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.45□□□□□ -2.18
CLDN20P56880 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CLDN20P56880 Y_RNA.65-201ENST00000362846 100 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms