Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC005176.2-201ENST00000596933 147 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 RBM11P1-201ENST00000604951 799 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 MTND1P7-201ENST00000632801 297 ntBASIC0.07□□□□□ -2.4
CLDN18P56856 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
CLDN18P56856 MIR377-201ENST00000362145 69 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 Y_RNA.9-201ENST00000362354 101 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 RNU6-593P-201ENST00000364716 112 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 RNA5SP517-201ENST00000364724 117 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 SNORA1.2-201ENST00000365189 134 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 Y_RNA.573-201ENST00000384763 105 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 RNA5SP118-201ENST00000410385 109 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 RNU6-1148P-201ENST00000410992 104 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 RPS3AP52-201ENST00000435639 297 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 RPL7P42-201ENST00000481005 679 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 RNU6-1012P-201ENST00000516606 109 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 RNU7-181P-201ENST00000517234 74 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 MIR4431-201ENST00000579990 94 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 MIR4676-201ENST00000583078 72 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 MIR4791-201ENST00000607666 84 ntBASIC0.06□□□□□ -2.4
CLDN18P56856 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.06□□□□□ -2.4
CLDN18P56856 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.05□□□□□ -2.4
CLDN18P56856 SNORD45.3-201ENST00000363836 72 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 RNU6-580P-201ENST00000365159 107 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 Y_RNA.559-201ENST00000384686 107 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 MTND4P28-201ENST00000426217 387 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.05□□□□□ -2.4
CLDN18P56856 MTND3P21-201ENST00000433774 331 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 FCF1P4-201ENST00000448326 183 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 AC098826.2-201ENST00000452011 651 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 RPL17P19-201ENST00000489069 552 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 AC087685.1-201ENST00000587507 141 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 uc_338.4-201ENST00000616635 176 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 MIR2909-201ENST00000617113 69 ntBASIC0.05□□□□□ -2.4
CLDN18P56856 Y_RNA.446-201ENST00000384178 104 ntBASIC0.04□□□□□ -2.4
CLDN18P56856 SNORD116-1-201ENST00000384335 95 ntBASIC0.04□□□□□ -2.4
CLDN18P56856 RNU6-601P-201ENST00000384540 107 ntBASIC0.04□□□□□ -2.4
CLDN18P56856 Y_RNA.517-201ENST00000384551 106 ntBASIC0.04□□□□□ -2.4
CLDN18P56856 RNU6-855P-201ENST00000410395 104 ntBASIC0.04□□□□□ -2.4
CLDN18P56856 RNU6-830P-201ENST00000516353 107 ntBASIC0.04□□□□□ -2.4
CLDN18P56856 RNU7-116P-201ENST00000516940 62 ntBASIC0.04□□□□□ -2.4
CLDN18P56856 MIR4264-201ENST00000583520 66 ntBASIC0.04□□□□□ -2.4
CLDN18P56856 POLR3GP1-201ENST00000594073 261 ntBASIC0.04□□□□□ -2.4
CLDN18P56856 LARP7P1-201ENST00000605576 316 ntBASIC0.04□□□□□ -2.4
CLDN18P56856 RNA5SP257-201ENST00000363023 116 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 Y_RNA.203-201ENST00000364106 102 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 RNU6-99P-201ENST00000364721 107 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 MIR181A1-201ENST00000385026 110 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 SNORA69.1-201ENST00000390904 137 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 MIR938-201ENST00000401216 83 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 MIR548F5-201ENST00000408421 86 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 RNU6-710P-201ENST00000410424 105 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 RNU6-847P-201ENST00000411115 108 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 RNU7-56P-201ENST00000458744 62 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 PRDX4P1-201ENST00000507189 574 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 RNU6-470P-201ENST00000515954 104 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 RNU6-436P-201ENST00000516171 114 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.03□□□□□ -2.4
CLDN18P56856 SNORA25.18-201ENST00000607153 114 ntBASIC0.03□□□□□ -2.4
CLDN18P56856 Y_RNA.89-201ENST00000363031 102 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 RNU6-626P-201ENST00000363354 107 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 RNY4P14-201ENST00000363656 96 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 Y_RNA.295-201ENST00000364918 102 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 RNU6-20P-201ENST00000384106 107 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 RNU6-364P-201ENST00000384387 107 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 MTND3P10-201ENST00000450967 341 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 AC107399.1-201ENST00000451226 265 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 RNU7-62P-201ENST00000458856 62 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 AC020891.4-201ENST00000605745 93 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 AC103591.3-201ENST00000608684 209 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
CLDN18P56856 Y_RNA.341-201ENST00000365341 102 ntBASIC0.01□□□□□ -2.41
CLDN18P56856 RNU6-1323P-201ENST00000384025 107 ntBASIC0.01□□□□□ -2.41
CLDN18P56856 RPL23AP54-201ENST00000495129 419 ntBASIC0.01□□□□□ -2.41
CLDN18P56856 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.01□□□□□ -2.41
CLDN18P56856 AC011352.1-201ENST00000512300 793 ntBASIC0.01□□□□□ -2.41
CLDN18P56856 RNA5SP94-201ENST00000516917 108 ntBASIC0.01□□□□□ -2.41
CLDN18P56856 AC026407.1-201ENST00000518369 204 ntBASIC0.01□□□□□ -2.41
CLDN18P56856 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.01□□□□□ -2.41
CLDN18P56856 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.01□□□□□ -2.41
CLDN18P56856 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.01□□□□□ -2.41
CLDN18P56856 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
CLDN18P56856 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
CLDN18P56856 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.01□□□□□ -2.41
CLDN18P56856 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.01□□□□□ -2.41
CLDN18P56856 RNU6-268P-201ENST00000364174 107 ntBASIC0□□□□□ -2.41
CLDN18P56856 Y_RNA.329-201ENST00000365209 107 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-125P-201ENST00000384505 107 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-1319P-201ENST00000390855 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-747P-201ENST00000390928 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-241P-201ENST00000391148 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-510P-201ENST00000391239 108 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-447P-201ENST00000410293 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-1118P-201ENST00000410382 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-1076P-201ENST00000410397 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-355P-201ENST00000410427 104 ntBASIC0□□□□□ -2.41
CLDN18P56856 RNU6-791P-201ENST00000410467 104 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms