Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR4771-2-201ENST00000577758 74 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 MIR548AO-201ENST00000579992 96 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 MIR4771-1-201ENST00000582617 74 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 AP000753.3-201ENST00000604083 169 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 AC015540.1-201ENST00000615828 501 ntBASIC0.13□□□□□ -2.39
CLDN6P56747 Y_RNA.476-201ENST00000384347 108 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 MT-TN-201ENST00000387400 73 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 MIR802-201ENST00000390235 94 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 RNU6-205P-201ENST00000390858 107 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 RNU6-679P-201ENST00000391003 106 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 SNORD71-201ENST00000411292 86 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 MTCO2P27-201ENST00000420740 428 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 AC015818.7-201ENST00000428754 109 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 AC087499.7-201ENST00000441958 109 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 SNRPGP12-201ENST00000449481 213 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 AC098826.2-201ENST00000452011 651 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 RPL7P42-201ENST00000481005 679 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 AC011352.1-201ENST00000512300 793 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 SNORA25.12-201ENST00000516202 82 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 Pinc.1-201ENST00000616452 154 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 AC092794.2-201ENST00000620933 563 ntBASIC0.12□□□□□ -2.39
CLDN6P56747 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.12□□□□□ -2.39
CLDN6P56747 Y_RNA.9-201ENST00000362354 101 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 Y_RNA.89-201ENST00000363031 102 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 SNORD45.3-201ENST00000363836 72 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 RNU6-580P-201ENST00000365159 107 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 RNU6-442P-201ENST00000383968 104 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 RNU6-767P-201ENST00000384132 107 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 MIR181A1-201ENST00000385026 110 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 RNU6-192P-201ENST00000391253 100 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 MTCO2P33-201ENST00000402100 465 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 MIR1912-201ENST00000410389 80 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 RPS3AP52-201ENST00000435639 297 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 MTND1P29-201ENST00000448112 647 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 MIR2053-201ENST00000459295 91 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 RNU6-155P-201ENST00000516347 100 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 AC022523.2-201ENST00000561045 150 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 RBM11P1-201ENST00000604951 799 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 AC022079.1-201ENST00000621546 602 ntBASIC0.11□□□□□ -2.39
CLDN6P56747 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.11□□□□□ -2.39
CLDN6P56747 RNY4P14-201ENST00000363656 96 ntBASIC0.1□□□□□ -2.39
CLDN6P56747 U8.17-201ENST00000391292 132 ntBASIC0.1□□□□□ -2.39
CLDN6P56747 RPL17P19-201ENST00000489069 552 ntBASIC0.1□□□□□ -2.39
CLDN6P56747 AC026407.1-201ENST00000518369 204 ntBASIC0.1□□□□□ -2.39
CLDN6P56747 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.1□□□□□ -2.39
CLDN6P56747 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.1□□□□□ -2.39
CLDN6P56747 MIR5589-201ENST00000579442 60 ntBASIC0.1□□□□□ -2.39
CLDN6P56747 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
CLDN6P56747 MIR4305-201ENST00000583252 102 ntBASIC0.1□□□□□ -2.39
CLDN6P56747 AC005176.2-201ENST00000596933 147 ntBASIC0.1□□□□□ -2.39
CLDN6P56747 RAC1P9-201ENST00000604990 392 ntBASIC0.1□□□□□ -2.39
CLDN6P56747 Y_RNA.41-201ENST00000362646 102 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 SNORD44.1-201ENST00000363202 61 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 RNU6-601P-201ENST00000384540 107 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 Y_RNA.517-201ENST00000384551 106 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 Y_RNA.537-201ENST00000384626 109 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 MIR518A1-201ENST00000385068 85 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
CLDN6P56747 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 MIR548F5-201ENST00000408421 86 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 SNORA40.8-201ENST00000411034 126 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 MTND4P28-201ENST00000426217 387 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.09□□□□□ -2.4
CLDN6P56747 RNU6-436P-201ENST00000516171 114 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 MIR4804-201ENST00000581683 73 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 AC005899.2-201ENST00000584353 90 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 AC087685.1-201ENST00000587507 141 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 MIR4791-201ENST00000607666 84 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 AC103591.3-201ENST00000608684 209 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 JPX_2.1-201ENST00000614161 69 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 MTND1P7-201ENST00000632801 297 ntBASIC0.09□□□□□ -2.4
CLDN6P56747 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.09□□□□□ -2.4
CLDN6P56747 RNA5SP517-201ENST00000364724 117 ntBASIC0.08□□□□□ -2.4
CLDN6P56747 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.08□□□□□ -2.4
CLDN6P56747 FCF1P4-201ENST00000448326 183 ntBASIC0.08□□□□□ -2.4
CLDN6P56747 MTND3P10-201ENST00000450967 341 ntBASIC0.08□□□□□ -2.4
CLDN6P56747 RNU6-830P-201ENST00000516353 107 ntBASIC0.08□□□□□ -2.4
CLDN6P56747 RNU7-181P-201ENST00000517234 74 ntBASIC0.08□□□□□ -2.4
CLDN6P56747 MIR4676-201ENST00000583078 72 ntBASIC0.08□□□□□ -2.4
CLDN6P56747 PISRT1.1-201ENST00000616930 107 ntBASIC0.08□□□□□ -2.4
CLDN6P56747 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
CLDN6P56747 Y_RNA.404-201ENST00000383978 102 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 Y_RNA.446-201ENST00000384178 104 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 Y_RNA.573-201ENST00000384763 105 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 MIR548K-201ENST00000408406 116 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 RNU6-855P-201ENST00000410395 104 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 RNU6-1199P-201ENST00000411249 104 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.07□□□□□ -2.4
CLDN6P56747 SCARNA8-201ENST00000515924 131 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 RNU6-307P-201ENST00000516743 106 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 MIR4667-201ENST00000578933 66 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 MIR4264-201ENST00000583520 66 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 LARP7P1-201ENST00000605576 316 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 MIR371B-201ENST00000638082 66 ntBASIC0.07□□□□□ -2.4
CLDN6P56747 Y_RNA.203-201ENST00000364106 102 ntBASIC0.06□□□□□ -2.4
CLDN6P56747 RNU6-99P-201ENST00000364721 107 ntBASIC0.06□□□□□ -2.4
CLDN6P56747 SNORA1.2-201ENST00000365189 134 ntBASIC0.06□□□□□ -2.4
CLDN6P56747 RNU6-20P-201ENST00000384106 107 ntBASIC0.06□□□□□ -2.4
CLDN6P56747 RNU6-125P-201ENST00000384505 107 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms