Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 RNU1-29P-201ENST00000606574 126 ntBASIC-0.41□□□□□ -2.48
FOXA3P55318 AL442067.1-201ENST00000613261 223 ntBASIC-0.41□□□□□ -2.48
FOXA3P55318 RNU6-161P-201ENST00000363051 106 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 SNORD28-201ENST00000384706 75 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 MIR215-201ENST00000384858 110 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 MIR514A2-201ENST00000385131 88 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 MIR514A3-201ENST00000385132 88 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 SNORD12C-201ENST00000386307 89 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 MIR501-201ENST00000390204 84 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.42□□□□□ -2.48
FOXA3P55318 HMGN1P33-201ENST00000432945 451 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 RNU2-60P-201ENST00000517290 128 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.42□□□□□ -2.48
FOXA3P55318 AC055872.1-201ENST00000570978 278 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 MIR4528-201ENST00000577763 90 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 RNU6-89P-201ENST00000606519 100 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 JPX_2.1-201ENST00000614161 69 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 AP000720.1-201ENST00000625091 483 ntBASIC-0.42□□□□□ -2.48
FOXA3P55318 MIR30D-201ENST00000362283 70 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 RNU6-46P-201ENST00000383860 107 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 RNU6-318P-201ENST00000384283 103 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 RNU6-913P-201ENST00000390913 95 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 RNA5SP300-201ENST00000391197 107 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 MIR190B-201ENST00000401119 79 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 RNU6-584P-201ENST00000410350 95 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 RNU2-61P-201ENST00000411069 191 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 MTCO1P5-201ENST00000433573 344 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.43□□□□□ -2.48
FOXA3P55318 AC107297.1-201ENST00000459991 176 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 RNU6-408P-201ENST00000515910 100 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.43□□□□□ -2.48
FOXA3P55318 AC006600.1-201ENST00000572529 153 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 AC109347.2-201ENST00000610220 349 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 AC244669.1-204ENST00000621564 178 ntBASIC-0.43□□□□□ -2.48
FOXA3P55318 RNU6-403P-201ENST00000363163 104 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 RNA5SP457-201ENST00000363657 124 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 SNORD72-201ENST00000390994 80 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 RNU6-192P-201ENST00000391253 100 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 SNORA75.4-201ENST00000391278 119 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 RNU4-30P-201ENST00000410245 143 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 AC096531.1-201ENST00000419107 107 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 SNORD126-201ENST00000459475 77 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.44□□□□□ -2.48
FOXA3P55318 RNA5SP480-201ENST00000516840 109 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 AC009094.1-201ENST00000564443 426 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 MTATP6P24-201ENST00000576835 677 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 AC018638.8-201ENST00000588755 281 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 POLR3GP1-201ENST00000594073 261 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 AL133255.1-201ENST00000606374 441 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 MIR3666-201ENST00000607845 111 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 MIR8055-201ENST00000610739 97 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 MIR6514-201ENST00000622549 70 ntBASIC-0.44□□□□□ -2.48
FOXA3P55318 RNU6-874P-201ENST00000362390 105 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 RNU6-961P-201ENST00000363893 105 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 SNORA24-201ENST00000384096 131 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 RNU6-601P-201ENST00000384540 107 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 MIR329-2-201ENST00000385029 84 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 MIR563-201ENST00000385080 79 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 MT-TF-201ENST00000387314 71 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 SNORD12B-201ENST00000410433 91 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 RNU6-602P-201ENST00000411155 105 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 FCF1P9-201ENST00000412546 282 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.45□□□□□ -2.48
FOXA3P55318 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 CHEK2P4-201ENST00000450340 246 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.45□□□□□ -2.48
FOXA3P55318 AC083798.1-201ENST00000472671 131 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.45□□□□□ -2.48
FOXA3P55318 MIR4645-201ENST00000583158 77 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 MIR3672-201ENST00000584290 82 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 MIR3925-201ENST00000584674 77 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.45□□□□□ -2.48
FOXA3P55318 MIR548AD-201ENST00000584780 82 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 AC008507.4-201ENST00000585464 127 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 AC087685.1-201ENST00000587507 141 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 AC006157.1-201ENST00000611750 366 ntBASIC-0.45□□□□□ -2.48
FOXA3P55318 SNORA70.25-201ENST00000612741 95 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms