Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC005357.1-201ENST00000588399 301 ntBASIC1.22□□□□□ -2.21
CDH13P55290 MIR378A-201ENST00000362177 66 ntBASIC1.21□□□□□ -2.22
CDH13P55290 RNU6-1048P-201ENST00000364054 107 ntBASIC1.21□□□□□ -2.22
CDH13P55290 Y_RNA.242-201ENST00000364473 110 ntBASIC1.21□□□□□ -2.22
CDH13P55290 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
CDH13P55290 RPL21P38-201ENST00000418090 167 ntBASIC1.21□□□□□ -2.22
CDH13P55290 AC098869.1-201ENST00000481627 292 ntBASIC1.21□□□□□ -2.22
CDH13P55290 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.21□□□□□ -2.22
CDH13P55290 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
CDH13P55290 RNU6-1153P-201ENST00000516760 105 ntBASIC1.21□□□□□ -2.22
CDH13P55290 AL442663.2-201ENST00000554385 511 ntBASIC1.21□□□□□ -2.22
CDH13P55290 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.21□□□□□ -2.22
CDH13P55290 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.21□□□□□ -2.22
CDH13P55290 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CDH13P55290 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDH13P55290 SNORA25.1-201ENST00000362326 128 ntBASIC1.2□□□□□ -2.22
CDH13P55290 SNORD14E-201ENST00000364009 85 ntBASIC1.2□□□□□ -2.22
CDH13P55290 RNU6-514P-201ENST00000384208 107 ntBASIC1.2□□□□□ -2.22
CDH13P55290 RNU6-763P-201ENST00000390865 106 ntBASIC1.2□□□□□ -2.22
CDH13P55290 AC245047.7-201ENST00000440265 293 ntBASIC1.2□□□□□ -2.22
CDH13P55290 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
CDH13P55290 AC090142.3-201ENST00000519012 385 ntBASIC1.2□□□□□ -2.22
CDH13P55290 AC019288.1-201ENST00000557918 224 ntBASIC1.2□□□□□ -2.22
CDH13P55290 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
CDH13P55290 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.2□□□□□ -2.22
CDH13P55290 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
CDH13P55290 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH13P55290 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDH13P55290 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDH13P55290 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.19□□□□□ -2.22
CDH13P55290 RNA5SP432-201ENST00000362480 116 ntBASIC1.19□□□□□ -2.22
CDH13P55290 Y_RNA.64-201ENST00000362845 102 ntBASIC1.19□□□□□ -2.22
CDH13P55290 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
CDH13P55290 RNU6-806P-201ENST00000365147 105 ntBASIC1.19□□□□□ -2.22
CDH13P55290 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
CDH13P55290 MIR215-201ENST00000384858 110 ntBASIC1.19□□□□□ -2.22
CDH13P55290 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
CDH13P55290 MTCO2P33-201ENST00000402100 465 ntBASIC1.19□□□□□ -2.22
CDH13P55290 BTF3P4-201ENST00000418852 495 ntBASIC1.19□□□□□ -2.22
CDH13P55290 RNU7-95P-201ENST00000459222 64 ntBASIC1.19□□□□□ -2.22
CDH13P55290 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.19□□□□□ -2.22
CDH13P55290 SNORA31.2-201ENST00000516019 134 ntBASIC1.19□□□□□ -2.22
CDH13P55290 SNORD111.1-201ENST00000516421 86 ntBASIC1.19□□□□□ -2.22
CDH13P55290 SNORA74.3-201ENST00000517108 154 ntBASIC1.19□□□□□ -2.22
CDH13P55290 AL022345.2-201ENST00000606307 135 ntBASIC1.19□□□□□ -2.22
CDH13P55290 AC013791.1-201ENST00000616619 62 ntBASIC1.19□□□□□ -2.22
CDH13P55290 RNU6-1272P-201ENST00000362776 107 ntBASIC1.18□□□□□ -2.22
CDH13P55290 Y_RNA.84-201ENST00000363011 104 ntBASIC1.18□□□□□ -2.22
CDH13P55290 RNU6-1205P-201ENST00000363625 106 ntBASIC1.18□□□□□ -2.22
CDH13P55290 RNU6-442P-201ENST00000383968 104 ntBASIC1.18□□□□□ -2.22
CDH13P55290 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CDH13P55290 AP1B1P2-201ENST00000416196 106 ntBASIC1.18□□□□□ -2.22
CDH13P55290 Y_RNA.637-201ENST00000459424 114 ntBASIC1.18□□□□□ -2.22
CDH13P55290 NDUFA4P2-201ENST00000489989 244 ntBASIC1.18□□□□□ -2.22
CDH13P55290 AC091959.1-201ENST00000495857 238 ntBASIC1.18□□□□□ -2.22
CDH13P55290 RNU6-947P-201ENST00000516264 106 ntBASIC1.18□□□□□ -2.22
CDH13P55290 SNORA27.4-201ENST00000516650 95 ntBASIC1.18□□□□□ -2.22
CDH13P55290 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
CDH13P55290 AC134026.1-201ENST00000623249 2239 ntBASIC1.17□□□□□ -2.22
CDH13P55290 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDH13P55290 Y_RNA.26-201ENST00000362539 101 ntBASIC1.17□□□□□ -2.22
CDH13P55290 SNORD38C-201ENST00000384381 69 ntBASIC1.17□□□□□ -2.22
CDH13P55290 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
CDH13P55290 MIR516B2-201ENST00000385190 85 ntBASIC1.17□□□□□ -2.22
CDH13P55290 SNORD12-201ENST00000391002 90 ntBASIC1.17□□□□□ -2.22
CDH13P55290 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
CDH13P55290 AC048334.1-201ENST00000477975 159 ntBASIC1.17□□□□□ -2.22
CDH13P55290 SNORD116-28-201ENST00000516123 91 ntBASIC1.17□□□□□ -2.22
CDH13P55290 RPL23AP91-201ENST00000569211 455 ntBASIC1.17□□□□□ -2.22
CDH13P55290 AC008507.4-201ENST00000585464 127 ntBASIC1.17□□□□□ -2.22
CDH13P55290 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
CDH13P55290 UBE2WP1-201ENST00000362030 340 ntBASIC1.16□□□□□ -2.22
CDH13P55290 Y_RNA.217-201ENST00000364214 105 ntBASIC1.16□□□□□ -2.22
CDH13P55290 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
CDH13P55290 RNU6-1109P-201ENST00000391187 107 ntBASIC1.16□□□□□ -2.22
CDH13P55290 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.16□□□□□ -2.22
CDH13P55290 AC113618.1-201ENST00000416747 285 ntBASIC1.16□□□□□ -2.22
CDH13P55290 SNORD11-201ENST00000459124 84 ntBASIC1.16□□□□□ -2.22
CDH13P55290 Y_RNA.641-201ENST00000459414 105 ntBASIC1.16□□□□□ -2.22
CDH13P55290 AL133373.1-201ENST00000497098 94 ntBASIC1.16□□□□□ -2.22
CDH13P55290 SERF1AP1-201ENST00000514575 187 ntBASIC1.16□□□□□ -2.22
CDH13P55290 RNU6-830P-201ENST00000516353 107 ntBASIC1.16□□□□□ -2.22
CDH13P55290 RNU7-43P-201ENST00000516554 64 ntBASIC1.16□□□□□ -2.22
CDH13P55290 AP003072.1-201ENST00000531740 145 ntBASIC1.16□□□□□ -2.22
CDH13P55290 AC006504.6-201ENST00000590142 199 ntBASIC1.16□□□□□ -2.22
CDH13P55290 AL096861.1-201ENST00000610899 123 ntBASIC1.16□□□□□ -2.22
CDH13P55290 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
CDH13P55290 SNORA7.1-201ENST00000363750 139 ntBASIC1.15□□□□□ -2.23
CDH13P55290 Y_RNA.326-201ENST00000365176 113 ntBASIC1.15□□□□□ -2.23
CDH13P55290 MIR802-201ENST00000390235 94 ntBASIC1.15□□□□□ -2.23
CDH13P55290 RNU6-1203P-201ENST00000410703 110 ntBASIC1.15□□□□□ -2.23
CDH13P55290 SNRPGP14-201ENST00000435400 219 ntBASIC1.15□□□□□ -2.23
CDH13P55290 MIR5692C2-201ENST00000577959 77 ntBASIC1.15□□□□□ -2.23
CDH13P55290 BX284668.6-201ENST00000606899 438 ntBASIC1.15□□□□□ -2.23
CDH13P55290 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CDH13P55290 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
CDH13P55290 RNU6-910P-201ENST00000390844 107 ntBASIC1.14□□□□□ -2.23
CDH13P55290 RNA5SP496-201ENST00000391240 109 ntBASIC1.14□□□□□ -2.23
CDH13P55290 MIR1278-201ENST00000408753 81 ntBASIC1.14□□□□□ -2.23
CDH13P55290 AL603825.1-201ENST00000438481 80 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms