Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL355375.2-201ENST00000574825 175 ntBASIC0.35□□□□□ -2.35
CDH6P55285 POLR3GP1-201ENST00000594073 261 ntBASIC0.35□□□□□ -2.35
CDH6P55285 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
CDH6P55285 AC022441.3-201ENST00000605737 136 ntBASIC0.35□□□□□ -2.35
CDH6P55285 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
CDH6P55285 U2.1-201ENST00000618978 145 ntBASIC0.35□□□□□ -2.35
CDH6P55285 Y_RNA.168-201ENST00000363740 102 ntBASIC0.34□□□□□ -2.36
CDH6P55285 Y_RNA.796-201ENST00000364268 102 ntBASIC0.34□□□□□ -2.36
CDH6P55285 Y_RNA.230-201ENST00000364348 109 ntBASIC0.34□□□□□ -2.36
CDH6P55285 Y_RNA.799-201ENST00000364992 102 ntBASIC0.34□□□□□ -2.36
CDH6P55285 Y_RNA.314-201ENST00000365114 102 ntBASIC0.34□□□□□ -2.36
CDH6P55285 RNU6-1175P-201ENST00000365200 107 ntBASIC0.34□□□□□ -2.36
CDH6P55285 Y_RNA.341-201ENST00000365341 102 ntBASIC0.34□□□□□ -2.36
CDH6P55285 RNU6-396P-201ENST00000365369 105 ntBASIC0.34□□□□□ -2.36
CDH6P55285 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
CDH6P55285 RNU6-442P-201ENST00000383968 104 ntBASIC0.34□□□□□ -2.36
CDH6P55285 RNU6-708P-201ENST00000384217 107 ntBASIC0.34□□□□□ -2.36
CDH6P55285 MIR140-201ENST00000385282 100 ntBASIC0.34□□□□□ -2.36
CDH6P55285 RNU6-710P-201ENST00000410424 105 ntBASIC0.34□□□□□ -2.36
CDH6P55285 RNU6-177P-201ENST00000411257 104 ntBASIC0.34□□□□□ -2.36
CDH6P55285 RPL23AP54-201ENST00000495129 419 ntBASIC0.34□□□□□ -2.36
CDH6P55285 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.34□□□□□ -2.36
CDH6P55285 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
CDH6P55285 RN7SKP295-201ENST00000517264 153 ntBASIC0.34□□□□□ -2.36
CDH6P55285 AC024405.2-202ENST00000532731 184 ntBASIC0.34□□□□□ -2.36
CDH6P55285 RBM11P1-201ENST00000604951 799 ntBASIC0.34□□□□□ -2.36
CDH6P55285 AC093783.1-201ENST00000612976 329 ntBASIC0.34□□□□□ -2.36
CDH6P55285 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.34□□□□□ -2.36
CDH6P55285 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.34□□□□□ -2.36
CDH6P55285 U6.92-201ENST00000636464 89 ntBASIC0.34□□□□□ -2.36
CDH6P55285 Y_RNA.203-201ENST00000364106 102 ntBASIC0.33□□□□□ -2.36
CDH6P55285 RNU6-1323P-201ENST00000384025 107 ntBASIC0.33□□□□□ -2.36
CDH6P55285 SNORA51.10-201ENST00000384418 136 ntBASIC0.33□□□□□ -2.36
CDH6P55285 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
CDH6P55285 snoU13.21-201ENST00000459368 105 ntBASIC0.33□□□□□ -2.36
CDH6P55285 HMGN1P10-201ENST00000474557 553 ntBASIC0.33□□□□□ -2.36
CDH6P55285 RNA5SP436-201ENST00000516020 115 ntBASIC0.33□□□□□ -2.36
CDH6P55285 Y_RNA.691-201ENST00000516611 103 ntBASIC0.33□□□□□ -2.36
CDH6P55285 RNU7-116P-201ENST00000516940 62 ntBASIC0.33□□□□□ -2.36
CDH6P55285 RNU7-181P-201ENST00000517234 74 ntBASIC0.33□□□□□ -2.36
CDH6P55285 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.33□□□□□ -2.36
CDH6P55285 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.33□□□□□ -2.36
CDH6P55285 Pinc.1-201ENST00000616452 154 ntBASIC0.33□□□□□ -2.36
CDH6P55285 AC007742.2-201ENST00000618226 398 ntBASIC0.33□□□□□ -2.36
CDH6P55285 MIR6515-201ENST00000619843 57 ntBASIC0.33□□□□□ -2.36
CDH6P55285 TPTEP1-208ENST00000636884 213 ntBASIC0.33□□□□□ -2.36
CDH6P55285 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CDH6P55285 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.33□□□□□ -2.36
CDH6P55285 RNU6-845P-201ENST00000362578 103 ntBASIC0.32□□□□□ -2.36
CDH6P55285 Y_RNA.118-201ENST00000363300 101 ntBASIC0.32□□□□□ -2.36
CDH6P55285 Y_RNA.310-201ENST00000365063 113 ntBASIC0.32□□□□□ -2.36
CDH6P55285 Y_RNA.570-201ENST00000384750 101 ntBASIC0.32□□□□□ -2.36
CDH6P55285 MIR573-201ENST00000384964 99 ntBASIC0.32□□□□□ -2.36
CDH6P55285 MIR520H-201ENST00000385126 88 ntBASIC0.32□□□□□ -2.36
CDH6P55285 U8.17-201ENST00000391292 132 ntBASIC0.32□□□□□ -2.36
CDH6P55285 MTCO2P33-201ENST00000402100 465 ntBASIC0.32□□□□□ -2.36
CDH6P55285 AC096644.2-201ENST00000429278 159 ntBASIC0.32□□□□□ -2.36
CDH6P55285 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
CDH6P55285 AC005042.3-201ENST00000453230 174 ntBASIC0.32□□□□□ -2.36
CDH6P55285 NDUFA4P2-201ENST00000489989 244 ntBASIC0.32□□□□□ -2.36
CDH6P55285 Y_RNA.673-201ENST00000516306 88 ntBASIC0.32□□□□□ -2.36
CDH6P55285 MIR548AO-201ENST00000579992 96 ntBASIC0.32□□□□□ -2.36
CDH6P55285 AC005730.3-201ENST00000583067 366 ntBASIC0.32□□□□□ -2.36
CDH6P55285 MIR5690-201ENST00000583739 73 ntBASIC0.32□□□□□ -2.36
CDH6P55285 AC087685.1-201ENST00000587507 141 ntBASIC0.32□□□□□ -2.36
CDH6P55285 AC015726.2-201ENST00000620112 122 ntBASIC0.32□□□□□ -2.36
CDH6P55285 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.32□□□□□ -2.36
CDH6P55285 AL589743.1-201ENST00000551932 2712 ntBASIC0.32□□□□□ -2.36
CDH6P55285 RNU6-369P-201ENST00000362515 102 ntBASIC0.31□□□□□ -2.36
CDH6P55285 RNU6-1209P-201ENST00000363655 107 ntBASIC0.31□□□□□ -2.36
CDH6P55285 Y_RNA.160-201ENST00000363677 92 ntBASIC0.31□□□□□ -2.36
CDH6P55285 Y_RNA.355-201ENST00000365462 98 ntBASIC0.31□□□□□ -2.36
CDH6P55285 MIR520F-201ENST00000384824 87 ntBASIC0.31□□□□□ -2.36
CDH6P55285 RNU6-205P-201ENST00000390858 107 ntBASIC0.31□□□□□ -2.36
CDH6P55285 PDCL2P1-201ENST00000419302 352 ntBASIC0.31□□□□□ -2.36
CDH6P55285 AC015818.7-201ENST00000428754 109 ntBASIC0.31□□□□□ -2.36
CDH6P55285 SNRPGP14-201ENST00000435400 219 ntBASIC0.31□□□□□ -2.36
CDH6P55285 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.31□□□□□ -2.36
CDH6P55285 AC087499.7-201ENST00000441958 109 ntBASIC0.31□□□□□ -2.36
CDH6P55285 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.31□□□□□ -2.36
CDH6P55285 MTCO3P10-201ENST00000455912 772 ntBASIC0.31□□□□□ -2.36
CDH6P55285 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
CDH6P55285 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.31□□□□□ -2.36
CDH6P55285 AC127455.1-201ENST00000565496 145 ntBASIC0.31□□□□□ -2.36
CDH6P55285 DEFB117-201ENST00000602356 141 ntBASIC0.31□□□□□ -2.36
CDH6P55285 AP003357.1-201ENST00000604497 148 ntBASIC0.31□□□□□ -2.36
CDH6P55285 MTND1P7-201ENST00000632801 297 ntBASIC0.31□□□□□ -2.36
CDH6P55285 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
CDH6P55285 RNU6-268P-201ENST00000364174 107 ntBASIC0.3□□□□□ -2.36
CDH6P55285 Y_RNA.456-201ENST00000384232 111 ntBASIC0.3□□□□□ -2.36
CDH6P55285 RNU6-342P-201ENST00000384521 104 ntBASIC0.3□□□□□ -2.36
CDH6P55285 MIR598-201ENST00000384868 97 ntBASIC0.3□□□□□ -2.36
CDH6P55285 SNORD83.1-201ENST00000411362 77 ntBASIC0.3□□□□□ -2.36
CDH6P55285 MTND1P34-201ENST00000438556 671 ntBASIC0.3□□□□□ -2.36
CDH6P55285 AC091951.2-201ENST00000500762 203 ntBASIC0.3□□□□□ -2.36
CDH6P55285 AC138305.3-201ENST00000624988 240 ntBASIC0.3□□□□□ -2.36
CDH6P55285 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
CDH6P55285 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
CDH6P55285 Y_RNA.27-201ENST00000362540 103 ntBASIC0.29□□□□□ -2.36
CDH6P55285 Y_RNA.166-201ENST00000363730 102 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms