Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ATXN1P54253 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ATXN1P54253 Y_RNA.120-201ENST00000363304 110 ntBASIC2.58□□□□□ -2
ATXN1P54253 RNU1-23P-201ENST00000363361 144 ntBASIC2.58□□□□□ -2
ATXN1P54253 SNORD45.3-201ENST00000363836 72 ntBASIC2.58□□□□□ -2
ATXN1P54253 Y_RNA.355-201ENST00000365462 98 ntBASIC2.58□□□□□ -2
ATXN1P54253 SNORA25B-201ENST00000365507 128 ntBASIC2.58□□□□□ -2
ATXN1P54253 RNU6-597P-201ENST00000365620 102 ntBASIC2.58□□□□□ -2
ATXN1P54253 AC245517.4-201ENST00000448601 281 ntBASIC2.58□□□□□ -2
ATXN1P54253 RNU6-857P-201ENST00000515893 110 ntBASIC2.58□□□□□ -2
ATXN1P54253 RNU6-1053P-201ENST00000515930 101 ntBASIC2.58□□□□□ -2
ATXN1P54253 Y_RNA.690-201ENST00000516603 95 ntBASIC2.58□□□□□ -2
ATXN1P54253 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.58□□□□□ -2
ATXN1P54253 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
ATXN1P54253 RNU6-324P-201ENST00000363957 106 ntBASIC2.57□□□□□ -2
ATXN1P54253 RNU6-1305P-201ENST00000364353 104 ntBASIC2.57□□□□□ -2
ATXN1P54253 RNU6-978P-201ENST00000364371 103 ntBASIC2.57□□□□□ -2
ATXN1P54253 RNU6-234P-201ENST00000365229 104 ntBASIC2.57□□□□□ -2
ATXN1P54253 SNORA67.2-201ENST00000384300 149 ntBASIC2.57□□□□□ -2
ATXN1P54253 RNU6-279P-201ENST00000391297 101 ntBASIC2.57□□□□□ -2
ATXN1P54253 MIR1278-201ENST00000408753 81 ntBASIC2.57□□□□□ -2
ATXN1P54253 RNA5SP270-201ENST00000411361 118 ntBASIC2.57□□□□□ -2
ATXN1P54253 CALM2P4-201ENST00000430810 426 ntBASIC2.57□□□□□ -2
ATXN1P54253 RNU7-141P-201ENST00000459304 62 ntBASIC2.57□□□□□ -2
ATXN1P54253 RNU7-14P-201ENST00000459331 62 ntBASIC2.57□□□□□ -2
ATXN1P54253 RNA5SP57-201ENST00000459463 123 ntBASIC2.57□□□□□ -2
ATXN1P54253 AC108729.3-201ENST00000513484 108 ntBASIC2.57□□□□□ -2
ATXN1P54253 RNU2-12P-201ENST00000517216 168 ntBASIC2.57□□□□□ -2
ATXN1P54253 MIR1273D-201ENST00000577266 86 ntBASIC2.57□□□□□ -2
ATXN1P54253 MIR5092-201ENST00000583139 88 ntBASIC2.57□□□□□ -2
ATXN1P54253 MIR4781-201ENST00000585250 76 ntBASIC2.57□□□□□ -2
ATXN1P54253 AP000942.3-201ENST00000603702 160 ntBASIC2.57□□□□□ -2
ATXN1P54253 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.57□□□□□ -2
ATXN1P54253 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.57□□□□□ -2
ATXN1P54253 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
ATXN1P54253 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.57□□□□□ -2
ATXN1P54253 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
ATXN1P54253 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
ATXN1P54253 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ATXN1P54253 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.57□□□□□ -2
ATXN1P54253 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
ATXN1P54253 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ATXN1P54253 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
ATXN1P54253 SNORA63.5-201ENST00000363548 123 ntBASIC2.56□□□□□ -2
ATXN1P54253 RNA5SP456-201ENST00000364002 114 ntBASIC2.56□□□□□ -2
ATXN1P54253 Y_RNA.287-201ENST00000364853 94 ntBASIC2.56□□□□□ -2
ATXN1P54253 Y_RNA.346-201ENST00000365385 112 ntBASIC2.56□□□□□ -2
ATXN1P54253 MIR586-201ENST00000385035 97 ntBASIC2.56□□□□□ -2
ATXN1P54253 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
ATXN1P54253 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.56□□□□□ -2
ATXN1P54253 MIR1302-5-201ENST00000408164 150 ntBASIC2.56□□□□□ -2
ATXN1P54253 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.56□□□□□ -2
ATXN1P54253 TOMM22P2-201ENST00000430735 237 ntBASIC2.56□□□□□ -2
ATXN1P54253 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.56□□□□□ -2
ATXN1P54253 AC011753.1-201ENST00000451001 220 ntBASIC2.56□□□□□ -2
ATXN1P54253 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.56□□□□□ -2
ATXN1P54253 SNORA4.4-201ENST00000515921 135 ntBASIC2.56□□□□□ -2
ATXN1P54253 RNA5SP281-201ENST00000516504 135 ntBASIC2.56□□□□□ -2
ATXN1P54253 RNU6-965P-201ENST00000516721 96 ntBASIC2.56□□□□□ -2
ATXN1P54253 AC006380.1-201ENST00000603598 186 ntBASIC2.56□□□□□ -2
ATXN1P54253 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ATXN1P54253 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
ATXN1P54253 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
ATXN1P54253 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ATXN1P54253 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ATXN1P54253 U3.8-201ENST00000363675 217 ntBASIC2.55□□□□□ -2
ATXN1P54253 RNU6-1276P-201ENST00000365372 104 ntBASIC2.55□□□□□ -2
ATXN1P54253 RNU6-546P-201ENST00000383991 107 ntBASIC2.55□□□□□ -2
ATXN1P54253 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
ATXN1P54253 MIR526A2-201ENST00000390198 65 ntBASIC2.55□□□□□ -2
ATXN1P54253 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.55□□□□□ -2
ATXN1P54253 RNU6-893P-201ENST00000458841 100 ntBASIC2.55□□□□□ -2
ATXN1P54253 AC107297.1-201ENST00000459991 176 ntBASIC2.55□□□□□ -2
ATXN1P54253 RPL36AP21-201ENST00000490372 323 ntBASIC2.55□□□□□ -2
ATXN1P54253 RN7SL636P-201ENST00000497504 294 ntBASIC2.55□□□□□ -2
ATXN1P54253 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
ATXN1P54253 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
ATXN1P54253 MIR378D2-201ENST00000580636 98 ntBASIC2.55□□□□□ -2
ATXN1P54253 MIR3202-2-201ENST00000635980 79 ntBASIC2.55□□□□□ -2
ATXN1P54253 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
ATXN1P54253 RNU6-647P-201ENST00000364243 107 ntBASIC2.54□□□□□ -2
ATXN1P54253 Y_RNA.528-201ENST00000384575 108 ntBASIC2.54□□□□□ -2
ATXN1P54253 MIR300-201ENST00000401138 83 ntBASIC2.54□□□□□ -2
ATXN1P54253 AL603914.1-201ENST00000401964 204 ntBASIC2.54□□□□□ -2
ATXN1P54253 AL355497.1-201ENST00000406262 551 ntBASIC2.54□□□□□ -2
ATXN1P54253 MIR1283-1-201ENST00000408494 87 ntBASIC2.54□□□□□ -2
ATXN1P54253 HMGN2P9-201ENST00000476875 229 ntBASIC2.54□□□□□ -2
ATXN1P54253 RNU6-412P-201ENST00000516434 106 ntBASIC2.54□□□□□ -2
ATXN1P54253 MIR4498-201ENST00000577599 66 ntBASIC2.54□□□□□ -2
ATXN1P54253 MIR4753-201ENST00000585119 83 ntBASIC2.54□□□□□ -2
ATXN1P54253 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ATXN1P54253 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
ATXN1P54253 RNU6-776P-201ENST00000364403 104 ntBASIC2.53□□□□□ -2
ATXN1P54253 RNU6-1022P-201ENST00000365049 104 ntBASIC2.53□□□□□ -2
ATXN1P54253 Y_RNA.310-201ENST00000365063 113 ntBASIC2.53□□□□□ -2
ATXN1P54253 Y_RNA.323-201ENST00000365157 109 ntBASIC2.53□□□□□ -2
ATXN1P54253 Y_RNA.544-201ENST00000384650 113 ntBASIC2.53□□□□□ -2
ATXN1P54253 MIR548B-201ENST00000385247 97 ntBASIC2.53□□□□□ -2
ATXN1P54253 AC073261.1-201ENST00000429409 121 ntBASIC2.53□□□□□ -2
ATXN1P54253 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms