Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 Y_RNA.412-201ENST00000384001 104 ntBASIC0.34□□□□□ -2.36
ACLYP53396 Y_RNA.446-201ENST00000384178 104 ntBASIC0.34□□□□□ -2.36
ACLYP53396 RNU6-177P-201ENST00000411257 104 ntBASIC0.34□□□□□ -2.36
ACLYP53396 AC244023.1-201ENST00000426884 112 ntBASIC0.34□□□□□ -2.36
ACLYP53396 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
ACLYP53396 RNU6-966P-201ENST00000516479 104 ntBASIC0.34□□□□□ -2.36
ACLYP53396 AC005176.2-201ENST00000596933 147 ntBASIC0.34□□□□□ -2.36
ACLYP53396 AC242498.1-201ENST00000604134 111 ntBASIC0.34□□□□□ -2.36
ACLYP53396 AC243994.1-201ENST00000618627 109 ntBASIC0.34□□□□□ -2.36
ACLYP53396 RNU6-623P-201ENST00000363143 105 ntBASIC0.33□□□□□ -2.36
ACLYP53396 RNU6-20P-201ENST00000384106 107 ntBASIC0.33□□□□□ -2.36
ACLYP53396 SNORD38C-201ENST00000384381 69 ntBASIC0.33□□□□□ -2.36
ACLYP53396 MTCO2P27-201ENST00000420740 428 ntBASIC0.33□□□□□ -2.36
ACLYP53396 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
ACLYP53396 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
ACLYP53396 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.33□□□□□ -2.36
ACLYP53396 RNU6-155P-201ENST00000516347 100 ntBASIC0.33□□□□□ -2.36
ACLYP53396 RNA5SP395-201ENST00000516567 118 ntBASIC0.33□□□□□ -2.36
ACLYP53396 AL355375.2-201ENST00000574825 175 ntBASIC0.33□□□□□ -2.36
ACLYP53396 AC012433.1-201ENST00000588916 398 ntBASIC0.33□□□□□ -2.36
ACLYP53396 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
ACLYP53396 RNU6-626P-201ENST00000363354 107 ntBASIC0.32□□□□□ -2.36
ACLYP53396 Y_RNA.577-201ENST00000384794 101 ntBASIC0.32□□□□□ -2.36
ACLYP53396 MIR573-201ENST00000384964 99 ntBASIC0.32□□□□□ -2.36
ACLYP53396 RNU6-192P-201ENST00000391253 100 ntBASIC0.32□□□□□ -2.36
ACLYP53396 MIR548F1-201ENST00000408667 84 ntBASIC0.32□□□□□ -2.36
ACLYP53396 RNU6-1156P-201ENST00000410365 100 ntBASIC0.32□□□□□ -2.36
ACLYP53396 RPL30P15-201ENST00000457129 321 ntBASIC0.32□□□□□ -2.36
ACLYP53396 HMGN1P10-201ENST00000474557 553 ntBASIC0.32□□□□□ -2.36
ACLYP53396 RNU6-1213P-201ENST00000517075 94 ntBASIC0.32□□□□□ -2.36
ACLYP53396 RBM11P1-201ENST00000604951 799 ntBASIC0.32□□□□□ -2.36
ACLYP53396 MIR6718-201ENST00000616153 80 ntBASIC0.32□□□□□ -2.36
ACLYP53396 RNU6-369P-201ENST00000362515 102 ntBASIC0.31□□□□□ -2.36
ACLYP53396 Y_RNA.146-201ENST00000363549 102 ntBASIC0.31□□□□□ -2.36
ACLYP53396 RNU6-396P-201ENST00000365369 105 ntBASIC0.31□□□□□ -2.36
ACLYP53396 RNY3P4-201ENST00000384428 101 ntBASIC0.31□□□□□ -2.36
ACLYP53396 MIR1277-201ENST00000408536 78 ntBASIC0.31□□□□□ -2.36
ACLYP53396 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.31□□□□□ -2.36
ACLYP53396 RNU6-120P-201ENST00000516077 103 ntBASIC0.31□□□□□ -2.36
ACLYP53396 AC002553.4-201ENST00000616896 331 ntBASIC0.31□□□□□ -2.36
ACLYP53396 AL669831.3-213ENST00000636676 183 ntBASIC0.31□□□□□ -2.36
ACLYP53396 RNU6-1323P-201ENST00000384025 107 ntBASIC0.3□□□□□ -2.36
ACLYP53396 MIR570-201ENST00000384917 97 ntBASIC0.3□□□□□ -2.36
ACLYP53396 AL589823.1-201ENST00000429577 183 ntBASIC0.3□□□□□ -2.36
ACLYP53396 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.3□□□□□ -2.36
ACLYP53396 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.3□□□□□ -2.36
ACLYP53396 RNU6-718P-201ENST00000516166 105 ntBASIC0.3□□□□□ -2.36
ACLYP53396 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.3□□□□□ -2.36
ACLYP53396 RNU6-830P-201ENST00000516353 107 ntBASIC0.3□□□□□ -2.36
ACLYP53396 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.3□□□□□ -2.36
ACLYP53396 AC087685.1-201ENST00000587507 141 ntBASIC0.3□□□□□ -2.36
ACLYP53396 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
ACLYP53396 Y_RNA.72-201ENST00000362894 103 ntBASIC0.29□□□□□ -2.36
ACLYP53396 Y_RNA.376-201ENST00000365638 108 ntBASIC0.29□□□□□ -2.36
ACLYP53396 RNU6-767P-201ENST00000384132 107 ntBASIC0.29□□□□□ -2.36
ACLYP53396 Y_RNA.458-201ENST00000384240 102 ntBASIC0.29□□□□□ -2.36
ACLYP53396 SNORD78.2-201ENST00000391076 69 ntBASIC0.29□□□□□ -2.36
ACLYP53396 SNRPGP14-201ENST00000435400 219 ntBASIC0.29□□□□□ -2.36
ACLYP53396 AP003327.1-201ENST00000529684 127 ntBASIC0.29□□□□□ -2.36
ACLYP53396 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
ACLYP53396 AC022441.3-201ENST00000605737 136 ntBASIC0.29□□□□□ -2.36
ACLYP53396 AC067863.3-201ENST00000624172 122 ntBASIC0.29□□□□□ -2.36
ACLYP53396 MIR377-201ENST00000362145 69 ntBASIC0.28□□□□□ -2.36
ACLYP53396 Y_RNA.203-201ENST00000364106 102 ntBASIC0.28□□□□□ -2.36
ACLYP53396 Y_RNA.329-201ENST00000365209 107 ntBASIC0.28□□□□□ -2.36
ACLYP53396 RNU6-442P-201ENST00000383968 104 ntBASIC0.28□□□□□ -2.36
ACLYP53396 RNU6-1215P-201ENST00000384441 102 ntBASIC0.28□□□□□ -2.36
ACLYP53396 RNU6-855P-201ENST00000410395 104 ntBASIC0.28□□□□□ -2.36
ACLYP53396 MCFD2P1-201ENST00000417812 300 ntBASIC0.28□□□□□ -2.36
ACLYP53396 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.28□□□□□ -2.36
ACLYP53396 PRDX4P1-201ENST00000507189 574 ntBASIC0.28□□□□□ -2.36
ACLYP53396 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
ACLYP53396 MIR548AO-201ENST00000579992 96 ntBASIC0.28□□□□□ -2.36
ACLYP53396 AL360085.1-201ENST00000604713 532 ntBASIC0.28□□□□□ -2.36
ACLYP53396 AC011476.5-201ENST00000615594 130 ntBASIC0.28□□□□□ -2.36
ACLYP53396 Pinc.1-201ENST00000616452 154 ntBASIC0.28□□□□□ -2.36
ACLYP53396 AC015726.2-201ENST00000620112 122 ntBASIC0.28□□□□□ -2.36
ACLYP53396 Y_RNA.230-201ENST00000364348 109 ntBASIC0.27□□□□□ -2.37
ACLYP53396 RNU6-580P-201ENST00000365159 107 ntBASIC0.27□□□□□ -2.37
ACLYP53396 RNU4-45P-201ENST00000365469 141 ntBASIC0.27□□□□□ -2.37
ACLYP53396 SNORA51.10-201ENST00000384418 136 ntBASIC0.27□□□□□ -2.37
ACLYP53396 MIR520H-201ENST00000385126 88 ntBASIC0.27□□□□□ -2.37
ACLYP53396 MT-TN-201ENST00000387400 73 ntBASIC0.27□□□□□ -2.37
ACLYP53396 MIR802-201ENST00000390235 94 ntBASIC0.27□□□□□ -2.37
ACLYP53396 U8.17-201ENST00000391292 132 ntBASIC0.27□□□□□ -2.37
ACLYP53396 SNORA75.6-201ENST00000391318 127 ntBASIC0.27□□□□□ -2.37
ACLYP53396 RNU6-710P-201ENST00000410424 105 ntBASIC0.27□□□□□ -2.37
ACLYP53396 RNU4-14P-201ENST00000410858 122 ntBASIC0.27□□□□□ -2.37
ACLYP53396 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.27□□□□□ -2.37
ACLYP53396 MTND1P2-201ENST00000430604 821 ntBASIC0.27□□□□□ -2.37
ACLYP53396 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
ACLYP53396 AC069439.1-201ENST00000494739 167 ntBASIC0.27□□□□□ -2.37
ACLYP53396 RNU7-30P-201ENST00000516835 62 ntBASIC0.27□□□□□ -2.37
ACLYP53396 RNU7-116P-201ENST00000516940 62 ntBASIC0.27□□□□□ -2.37
ACLYP53396 RNU7-4P-201ENST00000516961 62 ntBASIC0.27□□□□□ -2.37
ACLYP53396 RNU6-264P-201ENST00000517134 104 ntBASIC0.27□□□□□ -2.37
ACLYP53396 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.27□□□□□ -2.37
ACLYP53396 AC144568.1-201ENST00000520139 137 ntBASIC0.27□□□□□ -2.37
ACLYP53396 MIR4659A-201ENST00000580269 81 ntBASIC0.27□□□□□ -2.37
ACLYP53396 POLR3GP1-201ENST00000594073 261 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms