Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 Y_RNA.572-201ENST00000384757 98 ntBASIC1.61□□□□□ -2.15
CLCNKAP51800 SNORD58.1-201ENST00000391313 66 ntBASIC1.61□□□□□ -2.15
CLCNKAP51800 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.61□□□□□ -2.15
CLCNKAP51800 Z98949.2-201ENST00000440996 144 ntBASIC1.61□□□□□ -2.15
CLCNKAP51800 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.61□□□□□ -2.15
CLCNKAP51800 OR9P1P-201ENST00000496431 281 ntBASIC1.61□□□□□ -2.15
CLCNKAP51800 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.61□□□□□ -2.15
CLCNKAP51800 MIR8074-201ENST00000615081 81 ntBASIC1.61□□□□□ -2.15
CLCNKAP51800 AL365265.1-201ENST00000621045 234 ntBASIC1.61□□□□□ -2.15
CLCNKAP51800 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CLCNKAP51800 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CLCNKAP51800 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CLCNKAP51800 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CLCNKAP51800 MIR367-201ENST00000362299 68 ntBASIC1.6□□□□□ -2.15
CLCNKAP51800 SNORD68-201ENST00000363214 84 ntBASIC1.6□□□□□ -2.15
CLCNKAP51800 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
CLCNKAP51800 Y_RNA.476-201ENST00000384347 108 ntBASIC1.6□□□□□ -2.15
CLCNKAP51800 RNU6-360P-201ENST00000390944 104 ntBASIC1.6□□□□□ -2.15
CLCNKAP51800 AL034345.1-201ENST00000407768 123 ntBASIC1.6□□□□□ -2.15
CLCNKAP51800 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.6□□□□□ -2.15
CLCNKAP51800 CALM2P4-201ENST00000430810 426 ntBASIC1.6□□□□□ -2.15
CLCNKAP51800 RNU6-970P-201ENST00000516312 107 ntBASIC1.6□□□□□ -2.15
CLCNKAP51800 AC100767.1-201ENST00000528178 123 ntBASIC1.6□□□□□ -2.15
CLCNKAP51800 AC095038.3-201ENST00000634439 195 ntBASIC1.6□□□□□ -2.15
CLCNKAP51800 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CLCNKAP51800 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CLCNKAP51800 RNU6-1209P-201ENST00000363655 107 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 RNU6-674P-201ENST00000363831 107 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 Y_RNA.796-201ENST00000364268 102 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 Y_RNA.799-201ENST00000364992 102 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 Y_RNA.304-201ENST00000365011 112 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 RNU6-144P-201ENST00000383951 107 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 RNA5SP482-201ENST00000391269 118 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 MLLT10P1-201ENST00000418346 262 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 HMGN1P7-201ENST00000491722 313 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 RNU4-71P-201ENST00000516258 113 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 RNY3P16-201ENST00000516338 101 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.59□□□□□ -2.15
CLCNKAP51800 MIR4422-201ENST00000581938 83 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 SNORA28-201ENST00000606769 126 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 Y_RNA.802-201ENST00000614892 130 ntBASIC1.59□□□□□ -2.15
CLCNKAP51800 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.16
CLCNKAP51800 Y_RNA.24-201ENST00000362508 103 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 RNU6-414P-201ENST00000363705 104 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 RNY4P28-201ENST00000365281 93 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 RNU6-969P-201ENST00000383900 105 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CLCNKAP51800 U8.16-201ENST00000391279 133 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 RN7SKP101-201ENST00000411376 320 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 SNRPGP10-201ENST00000432323 225 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 RNU7-28P-201ENST00000516759 62 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 RNU6-1116P-201ENST00000517269 99 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 RPL23AP91-201ENST00000569211 455 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 MIR4724-201ENST00000579485 89 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 AP000942.3-201ENST00000603702 160 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 JPX_2.1-201ENST00000614161 69 ntBASIC1.58□□□□□ -2.16
CLCNKAP51800 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CLCNKAP51800 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CLCNKAP51800 MIR424-201ENST00000362227 98 ntBASIC1.57□□□□□ -2.16
CLCNKAP51800 RNU6-653P-201ENST00000363074 106 ntBASIC1.57□□□□□ -2.16
CLCNKAP51800 RNY1-201ENST00000364228 113 ntBASIC1.57□□□□□ -2.16
CLCNKAP51800 SNORA8.3-201ENST00000384679 139 ntBASIC1.57□□□□□ -2.16
CLCNKAP51800 MIR522-201ENST00000385071 87 ntBASIC1.57□□□□□ -2.16
CLCNKAP51800 MIR526A2-201ENST00000390198 65 ntBASIC1.57□□□□□ -2.16
CLCNKAP51800 Y_RNA.626-201ENST00000411288 95 ntBASIC1.57□□□□□ -2.16
CLCNKAP51800 AL603825.1-201ENST00000438481 80 ntBASIC1.57□□□□□ -2.16
CLCNKAP51800 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.57□□□□□ -2.16
CLCNKAP51800 RNA5SP168-201ENST00000516642 112 ntBASIC1.57□□□□□ -2.16
CLCNKAP51800 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
CLCNKAP51800 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.56□□□□□ -2.16
CLCNKAP51800 MIRLET7C-201ENST00000362160 84 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 RNU6-457P-201ENST00000363999 107 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 RNU6-923P-201ENST00000364753 107 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 RNU6-424P-201ENST00000384367 105 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 SNORA17.3-201ENST00000391159 129 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 MIR1298-201ENST00000408783 112 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 JTBP1-201ENST00000441314 247 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 PGBD4P5-201ENST00000445958 426 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 snoU13.9-201ENST00000458927 103 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 AC005908.1-201ENST00000468701 347 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 NDUFA4P2-201ENST00000489989 244 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.56□□□□□ -2.16
CLCNKAP51800 AC130289.1-201ENST00000577321 73 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 AC009779.6-201ENST00000603972 165 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.56□□□□□ -2.16
CLCNKAP51800 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
CLCNKAP51800 U8.5-201ENST00000364528 136 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 Y_RNA.262-201ENST00000364641 102 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 Y_RNA.308-201ENST00000365043 101 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 MIR626-201ENST00000385032 94 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 RNU6-493P-201ENST00000391321 108 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 AL161935.2-201ENST00000414627 60 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 PIGPP3-201ENST00000425307 415 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 FTH1P12-201ENST00000432137 551 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.55□□□□□ -2.16
CLCNKAP51800 SNORD11-201ENST00000459124 84 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 RNA5SP458-201ENST00000516188 119 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms